RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 OR2T11Q8NH01 316 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 DOK4Q8TEW6 326 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 CHTF18Q8WVB6 975 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 TWIST2Q8WVJ9 160 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 SMAD5Q99717 465 aaKnown RBP9.61□□□□□ -0.87
HDAC6-222ENST00000478095 ALOXE3Q9BYJ1 711 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 TUBB1Q9H4B7 451 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 NKIRAS1Q9NYS0 192 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 C5AR2Q9P296 337 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 ADAM29Q9UKF5 820 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 TRAF6Q9Y4K3 522 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 POLR3HQ9Y535 204 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-222ENST00000478095 DNAJC15Q9Y5T4 150 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 CHD6Q8TD26 2715 aa9.61□□□□□ -0.87
HDAC6-222ENST00000478095 SCN3AQ9NY46 2000 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 UQCRHLA0A096LP55 91 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 GNG14A0A1W2PPG7 69 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 SERTM1A2A2V5 107 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 A8MUI8 341 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 PIP5K1BO14986 540 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 PGRMC2O15173 223 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 SKAP2O75563 359 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-222ENST00000478095 CHEK2O96017 543 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 ALPPP05187 535 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 IL3P08700 152 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 TNNI3P19429 210 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 TIA1P31483 386 aaKnown RBP eCLIP9.6□□□□□ -0.87
HDAC6-222ENST00000478095 SERPINB5P36952 375 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 CD97P48960 835 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 ALDH9A1P49189 494 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 ST13P50502 369 aaKnown RBP9.6□□□□□ -0.87
HDAC6-222ENST00000478095 SOX8P57073 446 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 ABCE1P61221 599 aaKnown RBP9.6□□□□□ -0.87
HDAC6-222ENST00000478095 RAE1P78406 368 aaKnown RBP9.6□□□□□ -0.87
HDAC6-222ENST00000478095 ZNF33BQ06732 778 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 NR6A1Q15406 480 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 EXT1Q16394 746 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 SPIN4Q56A73 249 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 AGAP7PQ5VUJ5 663 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 FCRLBQ6BAA4 426 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 OR52E8Q6IFG1 317 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 LIAT1Q6ZQX7 453 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 TRIM46Q7Z4K8 759 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 CLYBLQ8N0X4 340 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 GOLGA6L1Q8N7Z2 621 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 CDC26Q8NHZ8 85 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 PSMF1Q92530 271 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 PPWD1Q96BP3 646 aaKnown RBP9.6□□□□□ -0.87
HDAC6-222ENST00000478095 ATP6V1G3Q96LB4 118 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 AGAP4Q96P64 663 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 C20orf27Q9GZN8 174 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 VIPAS39Q9H9C1 493 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 WDR41Q9HAD4 459 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 KCNK13Q9HB14 408 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 ADAP2Q9NPF8 381 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 LUZP4Q9P127 313 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 GIMAP2Q9UG22 337 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 ZDHHC2Q9UIJ5 367 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 MCM8Q9UJA3 840 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 ZNF451Q9Y4E5 1061 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 CCL27Q9Y4X3 112 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 CSAG2Q9Y5P2 127 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 IGSF10Q6WRI0 2623 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 ATRXP46100 2492 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 FAM208BQ5VWN6 2430 aa9.6□□□□□ -0.87
HDAC6-222ENST00000478095 TRBV11-1A0A0K0K1C0 115 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 BLACEA4D250 179 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 C17orf105B2RV13 164 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 TMEM114B3SHH9 223 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 SLC28A1O00337 649 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 RGS14O43566 566 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 MAN1A2O60476 641 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 RSL1D1O76021 490 aaKnown RBP9.59□□□□□ -0.87
HDAC6-222ENST00000478095 F10P00742 488 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 FGF4P08620 206 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 ICAM2P13598 275 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 STT3AP46977 705 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 SLC1A6P48664 564 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 TAS2R50P59544 299 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 BST1Q10588 318 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 SERTAD2Q14140 314 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 ELAVL1Q15717 326 aaKnown RBP9.59□□□□□ -0.87
HDAC6-222ENST00000478095 ZNF750Q32MQ0 723 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 UGT3A2Q3SY77 523 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 NADK2Q4G0N4 442 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 FAM180BQ6P0A1 224 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 ISLR2Q6UXK2 745 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 DGAT2L6Q6ZPD8 337 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 Q6ZSR9 355 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 ZNF781Q8N8C0 355 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 ZNF321PQ8N8H1 164 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 APCDD1LQ8NCL9 501 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 NFAM1Q8NET5 270 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-222ENST00000478095 DNAJB14Q8TBM8 379 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 M1APQ8TC57 530 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 PTPMT1Q8WUK0 201 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-222ENST00000478095 TANKQ92844 425 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 NCLNQ969V3 563 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 TM4SF18Q96CE8 201 aa9.59□□□□□ -0.87
HDAC6-222ENST00000478095 PPP1R36Q96LQ0 422 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms