RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MRGPRX2Q96LB1 330 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 CHCHD6Q9BRQ6 235 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 C2orf88Q9BSF0 95 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 TRMOQ9BU70 441 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM126AQ9BYI3 521 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 ABCG8Q9H221 673 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 FN3KQ9H479 309 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF624Q9P2J8 865 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 AFF4Q9UHB7 1163 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 FBXL2Q9UKC9 423 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 PCDHB10Q9UN67 800 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 PCDHB9Q9Y5E1 797 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 SNX10Q9Y5X0 201 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 PLXNA3P51805 1871 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 C7orf66A4D0T2 115 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 ACOD1A6NK06 481 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 NOBOXO60393 691 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 ULK1O75385 1050 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 SEC22BO75396 215 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 RECQL5O94762 991 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 KLHL18O94889 574 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 LPLP06858 475 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 MUC1P15941 1255 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 RORCP51449 518 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 MLLT1Q03111 559 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 TLE2Q04725 743 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 LIPEQ05469 1076 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 CLN3Q13286 438 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 FCN2Q15485 313 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 C1orf53Q5VUE5 145 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 SDHAF4Q5VUM1 108 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF534Q76KX8 674 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 PIWIL4Q7Z3Z4 852 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 KIAA0907Q7Z7F0 614 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 COMTD1Q86VU5 262 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 ENTHD1Q8IYW4 607 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 NPWQ8N729 165 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 MRPS24Q96EL2 167 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 C14orf144Q96I85 54 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 SEPT5Q99719 369 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 CMSS1Q9BQ75 279 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 H2AFJQ9BTM1 129 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 DUSP26Q9BV47 211 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 RHBGQ9H310 441 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 MRPS30Q9NP92 439 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 C19orf12Q9NSK7 152 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 NSMCE4AQ9NXX6 385 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 SEC14L3Q9UDX4 400 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 DUSP12Q9UNI6 340 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 SCN5AQ14524 2016 aa12.1□□□□□ -0.47
RTFDC1-207ENST00000477573 A0A096LPK6 155 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 A0A0J9YYE9 177 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 FABP12A6NFH5 140 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 C5orf52A6NGY3 159 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 TCAPO15273 167 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PSMD3O43242 534 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 LYRM1O43325 122 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PEX11BO96011 259 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 HRGP04196 525 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 HAPLN1P10915 354 aaPredicted RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 GPX3P22352 226 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PDHA2P29803 388 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 GPR15P49685 360 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 XKP51811 444 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 RPP30P78346 268 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 MAD2L1BPQ15013 274 aaPredicted RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 SF3A2Q15428 464 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF284Q2VY69 593 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PRSS36Q5K4E3 855 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 SAPCD1Q5SSQ6 148 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 CNKSR3Q6P9H4 555 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 LAX1Q8IWV1 398 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PRR18Q8N4B5 295 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 NETO2Q8NC67 525 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PHOSPHO1Q8TCT1 267 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 GPR152Q8TDT2 470 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 CRELD1Q96HD1 420 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 CXorf58Q96LI9 332 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 COL21A1Q96P44 957 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 CEP41Q9BYV8 373 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 METTL9Q9H1A3 318 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 TMEFF2Q9UIK5 374 aaPredicted RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PADI2Q9Y2J8 665 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 FNDC1Q4ZHG4 1894 aaPredicted RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 NUP205Q92621 2012 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 POM121BA6NF01 834 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 ARHGEF33A8MVX0 844 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 GSTA4O15217 222 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PLOD3O60568 738 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 LGI1O95970 557 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 MOCS2O96007 188 aaPredicted RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 MBP02144 154 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 HRH2P25021 359 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PTGFRP43088 359 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 CLCN7P51798 805 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 LIMK2P53671 638 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 STARD6P59095 220 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 RAB5BP61020 215 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms