RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZKSCAN5Q9Y2L8 839 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 A0A088AWK7 358 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 PABPN1LA6NDY0 278 aaKnown RBP10.43□□□□□ -0.74
BRCA1-213ENST00000476777 TRIM64A6NGJ6 449 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 TRIM64BA6NI03 449 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 TBX6O95947 436 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-213ENST00000476777 IL18BPO95998 194 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 TNNI3P19429 210 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 ZNF10P21506 573 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-213ENST00000476777 CTSSP25774 331 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 CERS1P27544 350 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 OPRM1P35372 400 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 VPS41P49754 854 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 PGGT1BP53609 377 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 PLA2G16P53816 162 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 IL2P60568 153 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 TBL3Q12788 808 aaKnown RBP10.43□□□□□ -0.74
BRCA1-213ENST00000476777 STX4Q12846 297 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 GPS1Q13098 491 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 EFTUD2Q15029 972 aaKnown RBP eCLIP10.43□□□□□ -0.74
BRCA1-213ENST00000476777 ADPRMQ3LIE5 342 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 RASGEF1CQ8N431 466 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 OR10G3Q8NGC4 313 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 NUBPLQ8TB37 319 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 JSRP1Q96MG2 331 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-213ENST00000476777 SERPINB12Q96P63 405 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 SERINC2Q96SA4 455 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 DESI2Q9BSY9 194 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 FAM167BQ9BTA0 163 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 PRDM14Q9GZV8 571 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 TSPY26PQ9H489 355 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 XAB2Q9HCS7 855 aaKnown RBP10.43□□□□□ -0.74
BRCA1-213ENST00000476777 COPS7AQ9UBW8 275 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 TRPS1Q9UHF7 1281 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 IKZF3Q9UKT9 509 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 CHCHD2Q9Y6H1 151 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-213ENST00000476777 KCNE2Q9Y6J6 123 aa10.43□□□□□ -0.74
BRCA1-213ENST00000476777 SH3D21A4FU49 640 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 MBD3L4A6NDZ8 208 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-213ENST00000476777 MBD3L3A6NE82 208 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-213ENST00000476777 MBD3L5A6NJ08 208 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-213ENST00000476777 CD8B2A6NJW9 211 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 GOLGA8MH3BSY2 632 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 LDB3O75112 727 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 C1QAP02745 245 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 ENO2P09104 434 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-213ENST00000476777 MAGEA3P43357 314 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 MTTPP55157 894 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 SERTAD2Q14140 314 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 RCN2Q14257 317 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 PPP1R3AQ16821 1122 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 VASNQ6EMK4 673 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 ABHD17CQ6PCB6 329 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 SBSNQ6UWP8 590 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 TMIGD1Q6UXZ0 262 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 SLCO4C1Q6ZQN7 724 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 YTHDF3Q7Z739 585 aaKnown RBP10.42□□□□□ -0.74
BRCA1-213ENST00000476777 C9orf40Q8IXQ3 194 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 PM20D2Q8IYS1 436 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 RNF10Q8N5U6 811 aaKnown RBP10.42□□□□□ -0.74
BRCA1-213ENST00000476777 SLC15A4Q8N697 577 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 MCUQ8NE86 351 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 TTLQ8NG68 377 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 OR2L5Q8NG80 312 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 MBD3L2Q8NHZ7 208 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-213ENST00000476777 SLC22A8Q8TCC7 542 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 CCT6BQ92526 530 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 PIGTQ969N2 578 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 ISL2Q96A47 359 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 SENP5Q96HI0 755 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-213ENST00000476777 SIGLEC10Q96LC7 697 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 RUNDC3BQ96NL0 473 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 REXO4Q9GZR2 422 aaKnown RBP10.42□□□□□ -0.74
BRCA1-213ENST00000476777 HOMER3Q9NSC5 361 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 CNIH4Q9P003 139 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 CNOT11Q9UKZ1 510 aaKnown RBP10.42□□□□□ -0.74
BRCA1-213ENST00000476777 CUBNO60494 3623 aa10.42□□□□□ -0.74
BRCA1-213ENST00000476777 HEATR5AQ86XA9 2040 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 CES2O00748 559 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 TRIM3O75382 744 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-213ENST00000476777 CLEC3AO75596 197 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 LRATO95237 230 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 FGGP02679 453 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 AHSGP02765 367 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 IGKV3-11P04433 115 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 FBXO45P0C2W1 286 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 C1GALT1C1LP0DN25 315 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 GDF1P27539 372 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 ID2Q02363 134 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 SLBPQ14493 270 aaKnown RBP eCLIP10.41□□□□□ -0.74
BRCA1-213ENST00000476777 SF3B4Q15427 424 aaKnown RBP eCLIP10.41□□□□□ -0.74
BRCA1-213ENST00000476777 TRIM40Q6P9F5 258 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 VN1R5Q7Z5H4 357 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 TMEM139Q8IV31 216 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 DND1Q8IYX4 353 aaKnown RBP10.41□□□□□ -0.74
BRCA1-213ENST00000476777 TXLNBQ8N3L3 684 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 C9orf106Q8NAJ2 232 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 FAM13CQ8NE31 585 aa10.41□□□□□ -0.74
BRCA1-213ENST00000476777 ANKRD9Q96BM1 317 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-213ENST00000476777 TRIB1Q96RU8 372 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms