RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 DOK4Q8TEW6 326 aa16.73■□□□□ 0.27
EFNA1-204ENST00000474413 ZNF721Q8TF20 911 aa16.73■□□□□ 0.27
EFNA1-204ENST00000474413 THAP3Q8WTV1 239 aaPredicted RBP16.73■□□□□ 0.27
EFNA1-204ENST00000474413 SREK1Q8WXA9 508 aaKnown RBP16.73■□□□□ 0.27
EFNA1-204ENST00000474413 VMP1Q96GC9 406 aa16.73■□□□□ 0.27
EFNA1-204ENST00000474413 CENPKQ9BS16 269 aa16.73■□□□□ 0.27
EFNA1-204ENST00000474413 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.73■□□□□ 0.273e-14■■□□□ 14.3
EFNA1-204ENST00000474413 TRIM45Q9H8W5 580 aaPredicted RBP16.73■□□□□ 0.27
EFNA1-204ENST00000474413 LIN28AQ9H9Z2 209 aaKnown RBP16.73■□□□□ 0.27
EFNA1-204ENST00000474413 BRF2Q9HAW0 419 aa16.73■□□□□ 0.27
EFNA1-204ENST00000474413 MS4A12Q9NXJ0 267 aa16.73■□□□□ 0.27
EFNA1-204ENST00000474413 MAP10Q9P2G4 905 aa16.73■□□□□ 0.27
EFNA1-204ENST00000474413 SLC12A4Q9UP95 1085 aa16.73■□□□□ 0.27
EFNA1-204ENST00000474413 SPTAN1Q13813 2472 aaKnown RBP16.72■□□□□ 0.27
EFNA1-204ENST00000474413 TLDC2A0PJX2 215 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 BLACEA4D250 179 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 C17orf105B2RV13 164 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 COPEO14579 308 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 ZNF354AO60765 605 aaPredicted RBP16.72■□□□□ 0.27
EFNA1-204ENST00000474413 VPS4BO75351 444 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 CLPSP04118 112 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 IGKV3-11P04433 115 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 KLK1P06870 262 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 TRHRP34981 398 aaPredicted RBP16.72■□□□□ 0.27
EFNA1-204ENST00000474413 STT3AP46977 705 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 NAGLUP54802 743 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 TAS2R50P59544 299 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 DNAJB13P59910 316 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 RAE1P78406 368 aaKnown RBP16.72■□□□□ 0.27
EFNA1-204ENST00000474413 STX4Q12846 297 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 SERTAD2Q14140 314 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 CCDC153Q494R4 210 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 RIBC1Q8N443 379 aaPredicted RBP16.72■□□□□ 0.27
EFNA1-204ENST00000474413 OR14A16Q8NHC5 309 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 FAR1Q8WVX9 515 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 SELENOMQ8WWX9 145 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 PPWD1Q96BP3 646 aaKnown RBP16.72■□□□□ 0.27
EFNA1-204ENST00000474413 C11orf24Q96F05 449 aaPredicted RBP16.72■□□□□ 0.27
EFNA1-204ENST00000474413 APOPT1Q96IL0 206 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 PRM3Q9NNZ6 103 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 OXSMQ9NWU1 459 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 SLC17A7Q9P2U7 560 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 ADAM29Q9UKF5 820 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 VPS4AQ9UN37 437 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 SNX6Q9UNH7 406 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 TIMM22Q9Y584 194 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 POLEQ07864 2286 aa16.72■□□□□ 0.27
EFNA1-204ENST00000474413 DOPEY2Q9Y3R5 2298 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 SEMA7AO75326 666 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 ESRRBO95718 433 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 MLYCDO95822 493 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 IFNA16P05015 189 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 MST1P26927 711 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 SOX18P35713 384 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 CLCN2P51788 898 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 PKNOX1P55347 436 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 ZNF844Q08AG5 666 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 INAQ16352 499 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 ZNF750Q32MQ0 723 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 ZNF766Q5HY98 468 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 TMEM132CQ8N3T6 1108 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 C1orf52Q8N6N3 182 aaKnown RBP16.71■□□□□ 0.27
EFNA1-204ENST00000474413 CCNYL1Q8N7R7 359 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 MORN4Q8NDC4 146 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 RDH11Q8TC12 318 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 TANKQ92844 425 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 UTP23Q9BRU9 249 aaKnown RBP16.71■□□□□ 0.27
EFNA1-204ENST00000474413 TMEM109Q9BVC6 243 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 DEFB126Q9BYW3 111 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 OR8D2Q9GZM6 311 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 GRID1Q9ULK0 1009 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 SPACA6W5XKT8 324 aa16.71■□□□□ 0.27
EFNA1-204ENST00000474413 DOPEY1Q5JWR5 2465 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 GPR75O95800 540 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 ENO1P06733 434 aaKnown RBP16.7■□□□□ 0.26
EFNA1-204ENST00000474413 CPA3P15088 417 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 ARRB2P32121 409 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 BUD31P41223 144 aaPredicted RBP16.7■□□□□ 0.26
EFNA1-204ENST00000474413 CCT5P48643 541 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 HMGCS1Q01581 520 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 DUSP2Q05923 314 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 CSTF3Q12996 717 aaKnown RBP16.7■□□□□ 0.26
EFNA1-204ENST00000474413 EIF2S3LQ2VIR3 472 aaKnown RBP16.7■□□□□ 0.26
EFNA1-204ENST00000474413 NDUFAF5Q5TEU4 345 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 OR52E8Q6IFG1 317 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 CYP20A1Q6UW02 462 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 SCIMPQ6UWF3 145 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 C10orf107Q8IVU9 208 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 C9orf40Q8IXQ3 194 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 SRRM1Q8IYB3 904 aaKnown RBP16.7■□□□□ 0.26
EFNA1-204ENST00000474413 CHTF18Q8WVB6 975 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 NR4A3Q92570 626 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 MID1IP1Q9NPA3 183 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 KLHL1Q9NR64 748 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 CES1P1Q9UKY3 287 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 PLLPQ9Y342 182 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 PCDHGB6Q9Y5F9 930 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 CLCA3PQ9Y6N3 262 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 ESPL1Q14674 2120 aa16.7■□□□□ 0.26
EFNA1-204ENST00000474413 ASPDHA6ND91 283 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms