RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 LRRC14BA6NHZ5 514 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 FAM90A27PA6NNH2 459 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 KERAO60938 352 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 ATP6AP2O75787 350 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 TOXO94900 526 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 SCELO95171 688 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 P04436 131 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 CELA3AP09093 270 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 CCL3P10147 92 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 MTHFD2P13995 350 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 COX7A2P14406 83 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 CHRNB4P30926 498 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 PIGAP37287 484 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 MAGEA5P43359 124 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 NUP107P57740 925 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 IRF9Q00978 393 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 CAV1Q03135 178 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 PCDH1Q08174 1060 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 SLC10A1Q14973 349 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 PFKFB4Q16877 469 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 NDUFAF5Q5TEU4 345 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 GRHL2Q6ISB3 625 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 ZDHHC24Q6UX98 284 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 GK5Q6ZS86 529 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 GPR180Q86V85 440 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 ACBD4Q8NC06 268 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 OR5M3Q8NGP4 307 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 OR10Q1Q8NGQ4 319 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 ANP32BQ92688 251 aaKnown RBP12.28□□□□□ -0.44
CPSF4-210ENST00000469897 UCN3Q969E3 161 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 SGCZQ96LD1 299 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 IL1RL2Q9HB29 575 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 MCCC2Q9HCC0 563 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 KCNJ16Q9NPI9 418 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 TUBA8Q9NY65 449 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-210ENST00000469897 COPS7AQ9UBW8 275 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 ATG4BQ9Y4P1 393 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 ANGPTL3Q9Y5C1 460 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 LIPGQ9Y5X9 500 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 MYO7BQ6PIF6 2116 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 ABCA12Q86UK0 2595 aa12.27□□□□□ -0.44
CPSF4-210ENST00000469897 PDZD2O15018 2839 aa12.27□□□□□ -0.44
CPSF4-210ENST00000469897 GLOD5A6NK44 160 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 PLPP1O14494 284 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 PRKRAO75569 313 aaKnown RBP12.27□□□□□ -0.45
CPSF4-210ENST00000469897 IGKV3-11P04433 115 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 C2P06681 752 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 CAPN3P20807 821 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 PTX3P26022 381 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-210ENST00000469897 SERPINB1P30740 379 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 CASQ1P31415 396 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 NEK2P51955 445 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 RAP1GDS1P52306 607 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 RPS13P62277 151 aaKnown RBP12.27□□□□□ -0.45
CPSF4-210ENST00000469897 IGLV3-21P80748 117 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-210ENST00000469897 FOLH1Q04609 750 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 FOXO1Q12778 655 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 MPEG1Q2M385 716 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 ZNF791Q3KP31 576 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-210ENST00000469897 MROH9Q5TGP6 573 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 SLC22A10Q63ZE4 541 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 ACAD11Q709F0 780 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 C9orf40Q8IXQ3 194 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 FAM109AQ8N4B1 249 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 GOLM1Q8NBJ4 401 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 C7orf57Q8NEG2 295 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 TANKQ92844 425 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 SMC6Q96SB8 1091 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 TREX2Q9BQ50 279 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-210ENST00000469897 LDAHQ9H6V9 325 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 ACTR8Q9H981 624 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 NPDC1Q9NQX5 325 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-210ENST00000469897 MS4A12Q9NXJ0 267 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 ALKBH4Q9NXW9 302 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 ADGRE2Q9UHX3 823 aa12.27□□□□□ -0.45
CPSF4-210ENST00000469897 IQANK1A0A1B0GTG1 560 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 A0A1B0GVC2 190 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 HMX2A2RU54 273 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 SYCE1LA8MT33 242 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 BCKDKO14874 412 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 PROM1O43490 865 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 DYRK3O43781 588 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 IGHG3P01860 377 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 GFAPP14136 432 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 ALOX15P16050 662 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-210ENST00000469897 ACVR2AP27037 513 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 TLX1P31314 330 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-210ENST00000469897 STX2P32856 288 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 PIK3CBP42338 1070 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 HNRNPH2P55795 449 aaKnown RBP12.26□□□□□ -0.45
CPSF4-210ENST00000469897 GUCY2DQ02846 1103 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 TFF3Q07654 80 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 BIKQ13323 160 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 ZNF267Q14586 743 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-210ENST00000469897 CPSF6Q16630 551 aaKnown RBP eCLIP12.26□□□□□ -0.45
CPSF4-210ENST00000469897 FAM83EQ2M2I3 478 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 LIPJQ5W064 366 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 TRILQ7L0X0 811 aa12.26□□□□□ -0.45
CPSF4-210ENST00000469897 CENPLQ8N0S6 344 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-210ENST00000469897 C17orf53Q8N3J3 647 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms