RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 RSL1D1O76021 490 aaKnown RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 MYO1DO94832 1006 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 ZWINTO95229 277 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 GPR75O95800 540 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 DDAH2O95865 285 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 GBAP04062 536 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 CHRNGP07510 517 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 MYZAPP0CAP1 466 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 PLA2G2AP14555 144 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 GSTM5P46439 218 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 MAPK12P53778 367 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 HMGCS1Q01581 520 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 FOLH1Q04609 750 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 STX4Q12846 297 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 KIAA0040Q15053 153 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 SPRED3Q2MJR0 410 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 PLEKHN1Q494U1 663 aaPredicted RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 ARL13AQ5H913 290 aaPredicted RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 ACER2Q5QJU3 275 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 CCNYL2Q5T2Q4 361 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 NDUFAF5Q5TEU4 345 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 CES4AQ5XG92 561 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 B3GNTL1Q67FW5 361 aaPredicted RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 OR52E8Q6IFG1 317 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 CLNKQ7Z7G1 428 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 ST13P4Q8IZP2 240 aaPredicted RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 C1orf52Q8N6N3 182 aaKnown RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 SIRT6Q8N6T7 355 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 OR8K3Q8NH51 312 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 DAZLQ92904 295 aaKnown RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 VMP1Q96GC9 406 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 APIPQ96GX9 242 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 PKNOX2Q96KN3 472 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 FCRL1Q96LA6 429 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 ZNF354BQ96LW1 612 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 BARD1Q99728 777 aaKnown RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 PELOQ9BRX2 385 aaKnown RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 EPN3Q9H201 632 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 TUBB1Q9H4B7 451 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 TRIM45Q9H8W5 580 aaPredicted RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 WDR41Q9HAD4 459 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 KCNK13Q9HB14 408 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 EML4Q9HC35 981 aaKnown RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 TEKT2Q9UIF3 430 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 WBP11Q9Y2W2 641 aaKnown RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 PCDHGA10Q9Y5H3 936 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 HEMK1Q9Y5R4 338 aaPredicted RBP8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 DNAJC15Q9Y5T4 150 aa8.84□□□□□ -0.99
SDCCAG3-208ENST00000466579 SHANK1Q9Y566 2161 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 ARHGAP10A1A4S6 786 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 C1orf226A1L170 272 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 TMEM200CA6NKL6 621 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 GUCY1B2O75343 617 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 PRKRAO75569 313 aaKnown RBP8.83□□□□□ -1
SDCCAG3-208ENST00000466579 SNUPNO95149 360 aaKnown RBP8.83□□□□□ -1
SDCCAG3-208ENST00000466579 IGKV3-11P04433 115 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 SLC35E2P0CK97 266 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 ALOX15P16050 662 aaPredicted RBP8.83□□□□□ -1
SDCCAG3-208ENST00000466579 SERPINB3P29508 390 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 TIA1P31483 386 aaKnown RBP eCLIP8.83□□□□□ -1
SDCCAG3-208ENST00000466579 TRHRP34981 398 aaPredicted RBP8.83□□□□□ -1
SDCCAG3-208ENST00000466579 TNFSF10P50591 281 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 CLCN2P51788 898 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 MLF1P58340 268 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 TAS2R50P59544 299 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 ACSM2AQ08AH3 577 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 MEP1AQ16819 746 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 ABHD17BQ5VST6 288 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 ACSM2BQ68CK6 577 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 CLEC6AQ6EIG7 209 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 RPUSD3Q6P087 351 aaKnown RBP8.83□□□□□ -1
SDCCAG3-208ENST00000466579 SLC48A1Q6P1K1 146 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 LINC00696Q6ZRV3 163 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 Q6ZSR9 355 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 ZCCHC23Q6ZST2 131 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 ZNF605Q86T29 641 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 CRLF3Q8IUI8 442 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 NUDCD3Q8IVD9 361 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 CLYBLQ8N0X4 340 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 KIF2BQ8N4N8 673 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 SLC5A8Q8N695 610 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 OR1N1Q8NGS0 311 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 ZNF721Q8TF20 911 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 SREK1Q8WXA9 508 aaKnown RBP8.83□□□□□ -1
SDCCAG3-208ENST00000466579 UCN3Q969E3 161 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 NCLNQ969V3 563 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 SHCBP1LQ9BZQ2 653 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 VIPAS39Q9H9C1 493 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 PRM3Q9NNZ6 103 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 PNO1Q9NRX1 252 aaKnown RBP8.83□□□□□ -1
SDCCAG3-208ENST00000466579 RYDENQ9NUL5 291 aaKnown RBP8.83□□□□□ -1
SDCCAG3-208ENST00000466579 HAO1Q9UJM8 370 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 TRAF6Q9Y4K3 522 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 PCDHGB6Q9Y5F9 930 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 CSAG2Q9Y5P2 127 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 CLCA3PQ9Y6N3 262 aa8.83□□□□□ -1
SDCCAG3-208ENST00000466579 WASHC1A8K0Z3 465 aa8.82□□□□□ -1
SDCCAG3-208ENST00000466579 A8MUA0 341 aa8.82□□□□□ -1
SDCCAG3-208ENST00000466579 C17orf105B2RV13 164 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms