RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 GDF3Q9NR23 364 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 TECRQ9NZ01 308 aaKnown RBP3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 ERVK-18Q9QC07 812 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 PTPRUQ92729 1446 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 CNTNAP2Q9UHC6 1331 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 CCDC69A6NI79 296 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 SHISA7A6NL88 538 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 RASGRF2O14827 1237 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 OR6B1O95007 311 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 REC8O95072 547 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 MT-ATP6P00846 226 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 PTMAP06454 111 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 ZSCAN5DPP0CG00 497 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 EZRP15311 586 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 ARF4P18085 180 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 CCNA2P20248 432 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 PPP2R1AP30153 589 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 ACADSBP45954 432 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 PITPNBP48739 271 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 KIAA0141Q14154 515 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 NECTIN1Q15223 517 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 MLF2Q15773 248 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 INAQ16352 499 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 CARTPTQ16568 116 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 UPP1Q16831 310 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 SHROOM1Q2M3G4 852 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 OR6B2Q6IFH4 312 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 C1orf186Q6ZWK4 172 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 COLGALT1Q8NBJ5 622 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 ANKRD20A12PQ8NF67 263 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 ATP8B4Q8TF62 1192 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 PCNPQ8WW12 178 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 MRPL53Q96EL3 112 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 PCED1BQ96HM7 432 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 CXorf58Q96LI9 332 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 KCNK16Q96T55 309 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 CBWD1Q9BRT8 395 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 MCRIP2Q9BUT9 160 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 HPS4Q9NQG7 708 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 FAM212BQ9NTI7 297 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 SPASTQ9UBP0 616 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 ASIC3Q9UHC3 531 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 PLEKHA6Q9Y2H5 1048 aa3.67□□□□□ -1.82
CDC42BPA-211ENST00000466538 IGHV4-30-2A0A087WSY4 118 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 IGHV3-38A0A0C4DH36 116 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 MEX3AA1L020 520 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 BCLAF3A2AJT9 711 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 OR5H15A6NDH6 313 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 A8MU76 341 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 G3V2L1 256 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 B4GAT1O43505 415 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 TSPAN2O60636 221 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 PDGFBP01127 241 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 KRT5P13647 590 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 UGT1A4P22310 534 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 CLK1P49759 484 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 LIMK2P53671 638 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 HYAL1Q12794 435 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 CALCOCO2Q13137 446 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 NFATC2Q13469 925 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 EXOSC7Q15024 291 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 WSCD2Q2TBF2 565 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 GPAT3Q53EU6 434 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 ZC2HC1BQ5TFG8 222 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 GFI1BQ5VTD9 330 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 WDR88Q6ZMY6 472 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 GDPGP1Q6ZNW5 385 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 PRSS33Q8NF86 280 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 OR52B6Q8NGF0 335 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 NR4A3Q92570 626 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 ATXN7L3BQ96GX2 97 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 TRIM51Q9BSJ1 452 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 DCTN5Q9BTE1 182 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 NACA2Q9H009 215 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 UPF3AQ9H1J1 476 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 THYN1Q9P016 225 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 MDFICQ9P1T7 246 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 THEGQ9P2T0 379 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 COPS7AQ9UBW8 275 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 DIMT1Q9UNQ2 313 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 MYH15Q9Y2K3 1946 aa3.66□□□□□ -1.82
CDC42BPA-211ENST00000466538 MEI4A8MW99 385 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 C19orf81C9J6K1 198 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 DCXO43602 365 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 IDH3BO43837 385 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 LRP3O75074 770 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 CSO75390 466 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 SYNGR4O95473 234 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 DUS4LO95620 317 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 FCER2P06734 321 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 FHP07954 510 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 MBL2P11226 248 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 CCL11P51671 97 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 HILS1P60008 231 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 IRX1P78414 480 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 FASTKQ14296 549 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 P2RY14Q15391 338 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 MS4A18Q3C1V0 323 aa3.65□□□□□ -1.83
CDC42BPA-211ENST00000466538 CDC42EP5Q6NZY7 148 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms