RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 MC1RQ01726 317 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 SPEM2Q0P670 501 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 TUBA3CQ13748 450 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 RAB39AQ14964 217 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 TOR1AIP1Q5JTV8 583 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 GALNT18Q6P9A2 607 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 KCTD8Q6ZWB6 473 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 RNF44Q7L0R7 432 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 ASPGQ86U10 573 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 ZDHHC13Q8IUH4 622 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 TTLQ8NG68 377 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 CCDC3Q9BQI4 270 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 CLMPQ9H6B4 373 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 C1GALT1Q9NS00 363 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 EXO1Q9UQ84 846 aaKnown RBP17.64■□□□□ 0.41
CAPN3-209ENST00000466222 MRPS2Q9Y399 296 aaKnown RBP17.64■□□□□ 0.41
CAPN3-209ENST00000466222 ZNF318Q5VUA4 2279 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 A0A1W2PQM1 296 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 CDX4O14627 284 aaPredicted RBP17.63■□□□□ 0.41
CAPN3-209ENST00000466222 NUBP1P53384 320 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 VSX2P58304 361 aaPredicted RBP17.63■□□□□ 0.41
CAPN3-209ENST00000466222 CCL7P80098 99 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 PMS2P3Q13401 168 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 ADPRMQ3LIE5 342 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 SPANXN4Q5MJ08 99 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 BROXQ5VW32 411 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 TBPL2Q6SJ96 375 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 TBC1D19Q8N5T2 526 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 TM4SF19Q96DZ7 209 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 MAGED4Q96JG8 741 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 PIF1Q9H611 641 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 VAPAQ9P0L0 249 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 EPHA6Q9UF33 1036 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.63■□□□□ 0.41
CAPN3-209ENST00000466222 PCDH15Q96QU1 1955 aa17.63■□□□□ 0.41
CAPN3-209ENST00000466222 ELOVL7A1L3X0 281 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 FAM220BPB1ANY3 271 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 DUX1O43812 170 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 TMPRSS11DO60235 418 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 DNAJB6O75190 326 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 CLIC3O95833 236 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 RETP07949 1114 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 PRPS2P11908 318 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 SERPINB1P30740 379 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 HNRNPFP52597 415 aaKnown RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 CLDN8P56748 225 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 PHC1P78364 1004 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 PROX2Q3B8N5 592 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 FAM174BQ3ZCQ3 159 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 RUNDC3AQ59EK9 446 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 TMEM214Q6NUQ4 689 aaKnown RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 ABHD17CQ6PCB6 329 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 ZNF574Q6ZN55 896 aaPredicted RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 THAP5Q7Z6K1 395 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 CLEC4FQ8N1N0 589 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 OR7A2PQ8NGA2 310 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 OR8K5Q8NH50 307 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 ZCCHC10Q8TBK6 192 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 UCN3Q969E3 161 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 NRBF2Q96F24 287 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 ZDHHC12Q96GR4 267 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 SLC6A16Q9GZN6 736 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 LIN28AQ9H9Z2 209 aaKnown RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 FAF1Q9UNN5 650 aaPredicted RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 PI4KAP42356 2102 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 ARID1BQ8NFD5 2236 aaPredicted RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 TLCD2A6NGC4 264 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 ERN1O75460 977 aaKnown RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 MYO1DO94832 1006 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 MAPK1P28482 360 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 TMBIM6P55061 237 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 TAS2R50P59544 299 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 GABARAPL2P60520 117 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 GPLD1P80108 840 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 TOP3AQ13472 1001 aaPredicted RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 OR4C11Q6IEV9 310 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 FAM180BQ6P0A1 224 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 PRSS41Q7RTY9 318 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 C8orf59Q8N0T1 100 aaPredicted RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 C16orf78Q8WTQ4 265 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 HDAC2Q92769 488 aaKnown RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 RGMAQ96B86 450 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 THUMPD3Q9BV44 507 aaKnown RBP17.62■□□□□ 0.41
CAPN3-209ENST00000466222 RAB33BQ9H082 229 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 ING2Q9H160 280 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 SYNDIG1Q9H7V2 258 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 PRDM7Q9NQW5 492 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 SOHLH2Q9NX45 425 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 ANKMY1Q9P2S6 941 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 V9GYQ6 96 aa17.62■□□□□ 0.41
CAPN3-209ENST00000466222 WASHC1A8K0Z3 465 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 G3V2T6 193 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 H3BMQ9 156 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 MT-ND1P03886 318 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 PGRP06401 933 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 ZNF888P0CJ79 500 aaPredicted RBP17.61■□□□□ 0.41
CAPN3-209ENST00000466222 RAB15P59190 212 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 OTUD3Q5T2D3 398 aaPredicted RBP17.61■□□□□ 0.41
CAPN3-209ENST00000466222 STK32CQ86UX6 486 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms