RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 TLX1P31314 330 aaPredicted RBP10.47□□□□□ -0.73
VCP-204ENST00000466100 RPL3P39023 403 aaKnown RBP10.47□□□□□ -0.73
VCP-204ENST00000466100 FRKP42685 505 aaPredicted RBP10.47□□□□□ -0.73
VCP-204ENST00000466100 ALDH9A1P49189 494 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 WNT3P56703 355 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 HSD17B7P56937 341 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 STX1BP61266 288 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 PHC1P78364 1004 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 BTG2P78543 158 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 DUSP2Q05923 314 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 KLF10Q13118 480 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 RPS6KA2Q15349 733 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 CEBPEQ15744 281 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 MLIPQ5VWP3 458 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 CPZQ66K79 652 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 ANKRD26P1Q6NSI1 321 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 R3HCC1LQ7Z5L2 792 aaKnown RBP10.47□□□□□ -0.73
VCP-204ENST00000466100 TREML1Q86YW5 311 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 CACNA2D3Q8IZS8 1091 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 ENDOVQ8N8Q3 282 aaKnown RBP10.47□□□□□ -0.73
VCP-204ENST00000466100 GLB1L3Q8NCI6 653 aaPredicted RBP10.47□□□□□ -0.73
VCP-204ENST00000466100 OR8J2Q8NGG1 315 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 STARD8Q92502 1023 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 TANKQ92844 425 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 MIEF2Q96C03 454 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 CNRIP1Q96F85 164 aaPredicted RBP10.47□□□□□ -0.73
VCP-204ENST00000466100 ZNF681Q96N22 645 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 CCDC106Q9BWC9 280 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 TMEM121BQ9BXQ6 578 aaPredicted RBP10.47□□□□□ -0.73
VCP-204ENST00000466100 FAM117AQ9C073 453 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 WDR41Q9HAD4 459 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 SLAMF7Q9NQ25 335 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 NECTIN3Q9NQS3 549 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 MRGBPQ9NV56 204 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 ARMCX1Q9P291 453 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 CROTQ9UKG9 612 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 NXT1Q9UKK6 140 aaKnown RBP10.47□□□□□ -0.73
VCP-204ENST00000466100 MAPRE3Q9UPY8 281 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 MRPS33Q9Y291 106 aaKnown RBP10.47□□□□□ -0.73
VCP-204ENST00000466100 MMACHCQ9Y4U1 282 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 AK5Q9Y6K8 562 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 ITPR1Q14643 2758 aa10.47□□□□□ -0.73
VCP-204ENST00000466100 ASPDHA6ND91 283 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 CAPN14A8MX76 684 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 C21orf140B9A014 251 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 LDB3O75112 727 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 DCTN3O75935 186 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 CAPNS1P04632 268 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 CCNYL3P0C7X3 344 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 LAMP1P11279 417 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 COX7A2P14406 83 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 TCN2P20062 427 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 CAPN3P20807 821 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 MAOAP21397 527 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 PIK3R1P27986 724 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 POLR2JP52435 117 aaKnown RBP10.46□□□□□ -0.73
VCP-204ENST00000466100 PCBP4P57723 403 aaKnown RBP10.46□□□□□ -0.73
VCP-204ENST00000466100 ID2Q02363 134 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 FOLH1Q04609 750 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 OCA2Q04671 838 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 TGIF1Q15583 401 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 DPY19L1Q2PZI1 675 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 FAM174BQ3ZCQ3 159 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 AGKQ53H12 422 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 SPANXN4Q5MJ08 99 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 FAM69BQ5VUD6 431 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 BLOC1S3Q6QNY0 202 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 GK5Q6ZS86 529 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 PRSS58Q8IYP2 241 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 FITM2Q8N6M3 262 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 PLPP5Q8NEB5 264 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 OR2Y1Q8NGV0 311 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 SUN3Q8TAQ9 357 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 GATA6Q92908 595 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 TSLPQ969D9 159 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 EXOSC8Q96B26 276 aaKnown RBP10.46□□□□□ -0.73
VCP-204ENST00000466100 PPCDCQ96CD2 204 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 KLHL29Q96CT2 875 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 YIPF2Q9BWQ6 316 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 BHLHE41Q9C0J9 482 aaPredicted RBP10.46□□□□□ -0.73
VCP-204ENST00000466100 SOX17Q9H6I2 414 aaPredicted RBP10.46□□□□□ -0.73
VCP-204ENST00000466100 MIEF1Q9NQG6 463 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 SLC35C2Q9NQQ7 365 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 PRTFDC1Q9NRG1 225 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 CCDC167Q9P0B6 97 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 DKK4Q9UBT3 224 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 GPN3Q9UHW5 284 aaPredicted RBP10.46□□□□□ -0.73
VCP-204ENST00000466100 UTS2RQ9UKP6 389 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 PCDHGA6Q9Y5G7 932 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 CAPN7Q9Y6W3 813 aa10.46□□□□□ -0.73
VCP-204ENST00000466100 ATMQ13315 3056 aa10.46□□□□□ -0.74
VCP-204ENST00000466100 DOCK10Q96BY6 2186 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 TCRBV16S1A1N1A0A5B0 115 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 MYO1GB0I1T2 1018 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 IDSB3KWA1 339 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 CLDN4O14493 209 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 TLX3O43711 291 aaPredicted RBP10.45□□□□□ -0.74
VCP-204ENST00000466100 GPR75O95800 540 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 PGRP06401 933 aa10.45□□□□□ -0.74
VCP-204ENST00000466100 PPP2R1BP30154 601 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms