RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PCDHGA3Q9Y5H0 932 aa15.99■□□□□ 0.15
EXOSC3-203ENST00000465229 A0A1B0GX78 115 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 ZNF860A6NHJ4 632 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 C9orf172C9J069 976 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 TMPRSS11DO60235 418 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 PCDH7O60245 1069 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 MYO1DO94832 1006 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 TNFSF15O95150 251 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 ANXA4P09525 319 aaPredicted RBP15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 ZNF10P21506 573 aaPredicted RBP15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 TACR1P25103 407 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 PEX2P28328 305 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 HNRNPFP52597 415 aaKnown RBP15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 RUNX2Q13950 521 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 PTGR1Q14914 329 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 CCNYL2Q5T2Q4 361 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 C1orf189Q5VU69 101 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 SHISA5Q8N114 240 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 METTL27Q8N6F8 245 aaPredicted RBP15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 OR8J3Q8NGG0 315 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 MVB12AQ96EY5 273 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 SLC45A3Q96JT2 553 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 BTBD9Q96Q07 612 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 SERINC2Q96SA4 455 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 EBPLQ9BY08 206 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 SLC7A5P2Q9GIP4 190 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 ALG2Q9H553 416 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 COPS7BQ9H9Q2 264 aaPredicted RBP15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 POLR1BQ9H9Y6 1135 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 ARMC1Q9NVT9 282 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 PTPRBP23467 1997 aa15.98■□□□□ 0.15
EXOSC3-203ENST00000465229 GNG14A0A1W2PPG7 69 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 B3GALT2O43825 422 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 PRMT3O60678 531 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 KCNH1O95259 989 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 HBQ1P09105 142 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 HTR1EP28566 365 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 OR1D4P47884 311 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 AVPR1BP47901 424 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 GSK3BP49841 420 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 OLR1P78380 273 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 SLAMF1Q13291 335 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 MRM1Q6IN84 353 aaKnown RBP15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 NIPAL1Q6NVV3 410 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 SLC2A7Q6PXP3 512 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 MSANTD1Q6ZTZ1 278 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 TICAM1Q8IUC6 712 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 OR5T3Q8NGG3 340 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 DNAJB14Q8TBM8 379 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 TESCQ96BS2 214 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 CLIP3Q96DZ5 547 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 MMABQ96EY8 250 aaPredicted RBP15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 GBP5Q96PP8 586 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 CGREF1Q99674 301 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 CNOT11Q9UKZ1 510 aaKnown RBP15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 CDC14AQ9UNH5 594 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 SNX13Q9Y5W8 968 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 MAU2Q9Y6X3 613 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 ARHGAP10A1A4S6 786 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 H0YIG0 161 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 CPNE3O75131 537 aaKnown RBP15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 RDH16O75452 317 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 PGRP06401 933 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 SDC1P18827 310 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 RORAP35398 523 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 MAPK12P53778 367 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 SKP1P63208 163 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 GABREP78334 506 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 LIPEQ05469 1076 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 CAMK2BQ13554 666 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 SLC9A5Q14940 896 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 TMEM164Q5U3C3 297 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 LPCAT4Q643R3 524 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 ZNF385CQ66K41 422 aaPredicted RBP15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 LILRA2Q8N149 483 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 TMEM102Q8N9M5 508 aaPredicted RBP15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.97■□□□□ 0.151e-6■■■■■ 43.1
EXOSC3-203ENST00000465229 GTF2H4Q92759 462 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 TM4SF18Q96CE8 201 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 SLC46A1Q96NT5 459 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 NR1H4Q96RI1 486 aaPredicted RBP15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 MAPKAP1Q9BPZ7 522 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 KCTD14Q9BQ13 255 aaPredicted RBP15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 ULBP3Q9BZM4 244 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 SPRY4Q9C004 299 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 CCM2LQ9NUG4 571 aaPredicted RBP15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 KCMF1Q9P0J7 381 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 SLAMF8Q9P0V8 285 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 ASB4Q9Y574 426 aa15.97■□□□□ 0.15
EXOSC3-203ENST00000465229 FAM58BPP0C7Q3 252 aa15.96■□□□□ 0.15
EXOSC3-203ENST00000465229 ATP6V1B2P21281 511 aa15.96■□□□□ 0.15
EXOSC3-203ENST00000465229 DGKQP52824 942 aa15.96■□□□□ 0.15
EXOSC3-203ENST00000465229 C21orf58P58505 322 aa15.96■□□□□ 0.15
EXOSC3-203ENST00000465229 MAT1AQ00266 395 aaKnown RBP15.96■□□□□ 0.15
EXOSC3-203ENST00000465229 KLC1Q07866 573 aa15.96■□□□□ 0.15
EXOSC3-203ENST00000465229 MAPKAPK3Q16644 382 aa15.96■□□□□ 0.15
EXOSC3-203ENST00000465229 FAM174BQ3ZCQ3 159 aa15.96■□□□□ 0.15
EXOSC3-203ENST00000465229 RABL3Q5HYI8 236 aa15.96■□□□□ 0.15
EXOSC3-203ENST00000465229 PROSER1Q86XN7 944 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms