RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 C16orf62Q7Z3J2 963 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 SERPINA11Q86U17 422 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 HPS6Q86YV9 775 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 FUNDC1Q8IVP5 155 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 SFTPA2Q8IWL1 248 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZC3H7AQ8IWR0 971 aaKnown RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 RIMKLAQ8IXN7 391 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 CCDC116Q8IYX3 515 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 METTL25Q8N6Q8 603 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 RNF148Q8N7C7 305 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 FAM47BQ8NA70 645 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 GOLM1Q8NBJ4 401 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 FAM13CQ8NE31 585 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 CATSPER1Q8NEC5 780 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 BHLHE22Q8NFJ8 381 aaPredicted RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 OR9A4Q8NGU2 314 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 OR51Q1Q8NH59 317 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 OR10A6Q8NH74 314 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 FLVCR1-AS1Q8TAF5 88 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 ADAMTS15Q8TE58 950 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 KLHL6Q8WZ60 621 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 FIG4Q92562 907 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 GTF2H4Q92759 462 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 TBC1D20Q96BZ9 403 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 PEX11GQ96HA9 241 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 MAGED4Q96JG8 741 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC41A2Q96JW4 573 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 CCDC74BQ96LY2 380 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 MAPKAP1Q9BPZ7 522 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 MACROD1Q9BQ69 325 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 SORBS1Q9BX66 1292 aaKnown RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 TPT1P8Q9HAU6 139 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 MKKSQ9NPJ1 570 aaPredicted RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 FSCN3Q9NQT6 498 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 STARD5Q9NSY2 213 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZCCHC3Q9NUD5 404 aaKnown RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC39A1Q9NY26 324 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 ACTR3BQ9P1U1 418 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 PTGFRNQ9P2B2 879 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 MAP10Q9P2G4 905 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 IFT80Q9P2H3 777 aaPredicted RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 COPS7AQ9UBW8 275 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 C19orf25Q9UFG5 118 aaPredicted RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 ATXN7L1Q9ULK2 861 aaPredicted RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 SAMD4AQ9UPU9 718 aaKnown RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 POMPQ9Y244 141 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 MAN2B2Q9Y2E5 1009 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 PADI2Q9Y2J8 665 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 FAM32AQ9Y421 112 aaKnown RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZNF451Q9Y4E5 1061 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 MAP4K5Q9Y4K4 846 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 PCDHB14Q9Y5E9 798 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 PCDHGA7Q9Y5G6 932 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 SNX13Q9Y5W8 968 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 CLCA3PQ9Y6N3 262 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 COL5A1P20908 1838 aaPredicted RBP5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 CCDC88CQ9P219 2028 aa5.52□□□□□ -1.53
RNU1-88P-201ENST00000459274 IGHV5-10-1A0A0J9YXX1 117 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 RNF103-CHMP3A0A140T963 221 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 A0A1W2PR48 441 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 AQP12BA6NM10 295 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 C4orf47A7E2U8 309 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 FAM220BPB1ANY3 271 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 D6RAR5 112 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PCDH17O14917 1159 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 TMPRSS11DO60235 418 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 CTNSO60931 367 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 CPNE3O75131 537 aaKnown RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 RDH16O75452 317 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 AIFM1O95831 613 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 HEXBP07686 556 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 ALOX5P09917 674 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 C8orf89P0DMQ9 161 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 NR2F1P10589 423 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 CPMP14384 443 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 HPGDP15428 266 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 ITGA2P17301 1181 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 GPX2P18283 190 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 ATP6V1C1P21283 382 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 MATN1P21941 496 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 IL12AP29459 219 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 CPOXP36551 454 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 FEN1P39748 380 aaKnown RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 XCR1P46094 333 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 CRISP3P54108 245 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PSMD4P55036 377 aaKnown RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 MTPNP58546 118 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 DSTNP60981 165 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 HBA1P69905 142 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 SHC2P98077 582 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 BNC1Q01954 994 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PDE7AQ13946 482 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 KCNAB1Q14722 419 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 KPNB1Q14974 876 aaKnown RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 SF3A2Q15428 464 aaKnown RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 RGNQ15493 299 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 TRIP6Q15654 476 aaKnown RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PRTGQ2VWP7 1150 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PROX2Q3B8N5 592 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 GPAT3Q53EU6 434 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms