RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 PRAMEF10O60809 474 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 PRAMEF4O60810 478 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 EFCAB14O75071 495 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CSO75390 466 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF821O75541 412 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 LEFTY1O75610 366 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 GPX5O75715 221 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CDRT1O95170 752 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 C1orf105O95561 183 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ETHE1O95571 254 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 EFEMP2O95967 443 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 LGI1O95970 557 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 MYCP01106 439 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TGFB1P01137 390 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 GASTP01350 101 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 FGBP02675 491 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CXCL10P02778 98 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 INHAP05111 366 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 KLK1P06870 262 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ADH1AP07327 375 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 NR2F1P10589 423 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 IL7P13232 177 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 DRD2P14416 443 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TIMP2P16035 220 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 SPNP16150 400 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF24P17028 368 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TNNI3P19429 210 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TNFRSF1BP20333 461 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 MAGP20916 626 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 FUT4P22083 530 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 MYL9P24844 172 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 AZGP1P25311 298 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ITGB7P26010 798 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ELAVL4P26378 380 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 HLA-DMAP28067 261 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CTGFP29279 349 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ERP29P30040 261 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 GABRA5P31644 462 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TNFSF8P32971 234 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ATP6V1E1P36543 226 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TALDO1P37837 337 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 MMP12P39900 470 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CTSOP43234 321 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 NR4A2P43354 598 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 GPR1P46091 355 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 HTR3AP46098 478 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CAPZA2P47755 286 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC9A3P48764 834 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CCR8P51685 355 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 PRMT2P55345 433 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 WNT4P56705 351 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 PCBP3P57721 371 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CAP1Q01518 475 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 SEMG2Q02383 582 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 UBE3AQ05086 875 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF91Q05481 1191 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 EEF1A2Q05639 463 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 FPGSQ05932 587 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TGM3Q08188 693 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CD300CQ08708 224 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 RAB40BQ12829 278 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TMEM115Q12893 351 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 HSPB3Q12988 150 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TARDBPQ13148 414 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 HNRNPA0Q13151 305 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 RPA4Q13156 261 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 GPR50Q13585 617 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 DSG2Q14126 1118 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 E2F2Q14209 437 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ARHGAP19Q14CB8 494 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 LARS2Q15031 903 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CDK10Q15131 360 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ANGPT1Q15389 498 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 SNAPC1Q16533 368 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CARTPTQ16568 116 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 DUSP6Q16828 381 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC5A12Q1EHB4 618 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 LRRC26Q2I0M4 334 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TBRG1Q3YBR2 411 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZNF385BQ569K4 471 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ARSIQ5FYB1 569 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 LRRC73Q5JTD7 316 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 COX20Q5RI15 118 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ATAT1Q5SQI0 421 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC25A30Q5SVS4 291 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 HACD4Q5VWC8 232 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 PRAMEF8Q5VWM4 474 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 PRAMEF9Q5VWM5 478 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 KHDRBS2Q5VWX1 349 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 PRAMEF7Q5VXH5 474 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 SAXO2Q658L1 398 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 BICRALQ6AI39 1079 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 RAET1GQ6H3X3 334 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TYW3Q6IPR3 259 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CDC73Q6P1J9 531 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TNFAIP8L2Q6P589 184 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 C19orf48Q6RUI8 117 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 METAP1DQ6UB28 335 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 PLET1Q6UQ28 207 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 TMIGD1Q6UXZ0 262 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms