RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 RNF4P78317 190 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 FOLH1Q04609 750 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 CUL3Q13618 768 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 GLE1Q53GS7 698 aaKnown RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 CMPK2Q5EBM0 449 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 BNC2Q6ZN30 1099 aaPredicted RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 DGAT2L6Q6ZPD8 337 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 GPR180Q86V85 440 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 TICAM1Q8IUC6 712 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 CTAGE4Q8IX94 777 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 OR4N5Q8IXE1 308 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PTGR2Q8N8N7 351 aaPredicted RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PSD4Q8NDX1 1056 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 SREK1Q8WXA9 508 aaKnown RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 ASB15Q8WXK1 588 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 TANKQ92844 425 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PHF21BQ96EK2 531 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 CENPKQ9BS16 269 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 NOL11Q9H8H0 719 aaKnown RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 DDX31Q9H8H2 851 aaKnown RBP11.57□□□□□ -0.56
CPSF4-208ENST00000452047 ZBTB26Q9HCK0 441 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PRM3Q9NNZ6 103 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 TIMMDC1Q9NPL8 285 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 HPF1Q9NWY4 346 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PSD3Q9NYI0 1048 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PHF11Q9UIL8 331 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PCTPQ9UKL6 214 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 PPT2Q9UMR5 302 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 ERVK-11Q9UQG0 969 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 MEMO1Q9Y316 297 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 ASB4Q9Y574 426 aa11.57□□□□□ -0.56
CPSF4-208ENST00000452047 ZNF407Q9C0G0 2248 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 A0A0G2JMM0 328 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 A0A1W2PPB8 328 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 A0A1W2PRS3 328 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 PINLYPA6NC86 204 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 KIR3DP1A8MWS1 328 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 STX16-NPEPL1H3BU86 382 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 HRKO00198 91 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 STX16O14662 325 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 TFECO14948 347 aaPredicted RBP11.56□□□□□ -0.56
CPSF4-208ENST00000452047 HNRNPRO43390 633 aaKnown RBP11.56□□□□□ -0.56
CPSF4-208ENST00000452047 PROM1O43490 865 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 HS6ST1O60243 411 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 KRT38O76015 456 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 CLDN9O95484 217 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 RBP1P09455 135 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 COL6A2P12110 1019 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 ABOP16442 354 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 TNNI3P19429 210 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 CNTFP26441 200 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 NEK2P51955 445 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 PHEXP78562 749 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 PLIN5Q00G26 463 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 TRAF3Q13114 568 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 TSNAXIP1Q2TAA8 658 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 SP5Q6BEB4 398 aaPredicted RBP11.56□□□□□ -0.56
CPSF4-208ENST00000452047 IL20RBQ6UXL0 311 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 TAOK1Q7L7X3 1001 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 DOLPP1Q86YN1 238 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 C7orf57Q8NEG2 295 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 AGAP11Q8TF27 550 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 SENP5Q96HI0 755 aaPredicted RBP11.56□□□□□ -0.56
CPSF4-208ENST00000452047 SCYL1Q96KG9 808 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 NSUN5Q96P11 429 aaKnown RBP11.56□□□□□ -0.56
CPSF4-208ENST00000452047 DGAT2Q96PD7 388 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 CDK15Q96Q40 435 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 PHF12Q96QT6 1004 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 NTMT1Q9BV86 223 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 COPS7AQ9UBW8 275 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 TMCO1Q9UM00 188 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 IKBKGQ9Y6K9 419 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 OTOGQ6ZRI0 2925 aa11.56□□□□□ -0.56
CPSF4-208ENST00000452047 PDZD2O15018 2839 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 A0A087WUV0 522 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 A0A1W2PR48 441 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 ARHGAP10A1A4S6 786 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 WASHC1A8K0Z3 465 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 TRIM49D1C9J1S8 452 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 POC1B-GALNT4F8VUJ3 575 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 ADAM10O14672 748 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 SEMA3DO95025 777 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 RPS17P08708 135 aaKnown RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 SBK3P0C264 359 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 NR2F6P10588 404 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 ESRRAP11474 423 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 PRF1P14222 555 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 COX7A2P14406 83 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 ALOX15P16050 662 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 AGAP20933 346 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 GCAP28676 217 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 TLX1P31314 330 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 BUD31P41223 144 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 NR0B1P51843 470 aaKnown RBP11.55□□□□□ -0.56
CPSF4-208ENST00000452047 BIKQ13323 160 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 CDSNQ15517 529 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 MPEG1Q2M385 716 aa11.55□□□□□ -0.56
CPSF4-208ENST00000452047 SPRED3Q2MJR0 410 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms