RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PKNOX1P55347 436 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 HNRNPH2P55795 449 aaKnown RBP13.62□□□□□ -0.23
USP39-206ENST00000448971 NAA20P61599 178 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 CEP85LQ5SZL2 805 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 LIPMQ5VYY2 423 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 MYO7BQ6PIF6 2116 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 FRMD7Q6ZUT3 714 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 PAGE2Q7Z2X7 111 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 GPR180Q86V85 440 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 SLC5A8Q8N695 610 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 BANPQ8N9N5 519 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 M1APQ8TC57 530 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 METTL6Q8TCB7 284 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 AGAP11Q8TF27 550 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 PSMF1Q92530 271 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 ZNF717Q9BY31 904 aaPredicted RBP13.62□□□□□ -0.23
USP39-206ENST00000448971 CENPHQ9H3R5 247 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 WDR41Q9HAD4 459 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 ADAP2Q9NPF8 381 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 PSD3Q9NYI0 1048 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 AHSPQ9NZD4 102 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 KCMF1Q9P0J7 381 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 ABI3Q9P2A4 366 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 ZNF225Q9UK10 706 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 CSAG2Q9Y5P2 127 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 CROCCQ5TZA2 2017 aa13.62□□□□□ -0.23
USP39-206ENST00000448971 MYOCOSA0A1B0GUC4 107 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 TGFBR3LH3BV60 316 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 MANBAO00462 879 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 TMPRSS11DO60235 418 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 PRKRAO75569 313 aaKnown RBP13.61□□□□□ -0.23
USP39-206ENST00000448971 ESRRBO95718 433 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 F10P00742 488 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 PPP2R1BP30154 601 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 HTR6P50406 440 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 DNAJB13P59910 316 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 ID2Q02363 134 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 ASPHQ12797 758 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 CSTF3Q12996 717 aaKnown RBP13.61□□□□□ -0.23
USP39-206ENST00000448971 SERTAD2Q14140 314 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 PCLAFQ15004 111 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 FCRLBQ6BAA4 426 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 CUZD1Q86UP6 607 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 C10orf107Q8IVU9 208 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 DNAJB14Q8TBM8 379 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 KCNA7Q96RP8 456 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 TMEM109Q9BVC6 243 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 RPF2Q9H7B2 306 aaKnown RBP13.61□□□□□ -0.23
USP39-206ENST00000448971 DDX31Q9H8H2 851 aaKnown RBP13.61□□□□□ -0.23
USP39-206ENST00000448971 BRF2Q9HAW0 419 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 OXSMQ9NWU1 459 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 NMRK1Q9NWW6 199 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 SENP1Q9P0U3 644 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 PLLPQ9Y342 182 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 C2CD3Q4AC94 2353 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 FBN2P35556 2912 aa13.61□□□□□ -0.23
USP39-206ENST00000448971 PDZD2O15018 2839 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 H3BQF6 201 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 FGF17O60258 216 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 CTNSO60931 367 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 ULK1O75385 1050 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 AIFM1O95831 613 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 KLK1P06870 262 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 FAM58BPP0C7Q3 252 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 HSD3B1P14060 373 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 COX7A2P14406 83 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 POU3F2P20265 443 aaPredicted RBP13.6□□□□□ -0.23
USP39-206ENST00000448971 HSD3B2P26439 372 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 PLIN5Q00G26 463 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 TLR1Q15399 786 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 TERF2Q15554 542 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 ELAVL1Q15717 326 aaKnown RBP13.6□□□□□ -0.23
USP39-206ENST00000448971 CCNYL2Q5T2Q4 361 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 C18orf63Q68DL7 685 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 IGFL2Q6UWQ7 119 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 COMMD6Q7Z4G1 85 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 SLC34A3Q8N130 599 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 KIF2BQ8N4N8 673 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 ST6GALNAC3Q8NDV1 305 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 B3GNT7Q8NFL0 401 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 TCP10LQ8TDR4 215 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 SREK1Q8WXA9 508 aaKnown RBP13.6□□□□□ -0.23
USP39-206ENST00000448971 ZBTB9Q96C00 473 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 ZNF354BQ96LW1 612 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 ZIM3Q96PE6 472 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 LMF1Q96S06 567 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 ALOXE3Q9BYJ1 711 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 SHCBP1LQ9BZQ2 653 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.6□□□□□ -0.23
USP39-206ENST00000448971 SLC17A7Q9P2U7 560 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 ATG4BQ9Y4P1 393 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 TIMM22Q9Y584 194 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 CLDN16Q9Y5I7 305 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 CLCA3PQ9Y6N3 262 aa13.6□□□□□ -0.23
USP39-206ENST00000448971 F8P00451 2351 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 PKDREJQ9NTG1 2253 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 CSMD2Q7Z408 3487 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 TRBV11-1A0A0K0K1C0 115 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 TRIM13O60858 407 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms