RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 M1APQ8TC57 530 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 TM9SF4Q92544 642 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 DGAT2Q96PD7 388 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 TRIM4Q9C037 500 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 EML4Q9HC35 981 aaKnown RBP11.14□□□□□ -0.63
RFC4-208ENST00000447345 MMP25Q9NPA2 562 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 PLA2G3Q9NZ20 509 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 C5AR2Q9P296 337 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 ADAM29Q9UKF5 820 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 PCDHGB7Q9Y5F8 929 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 EML6Q6ZMW3 1958 aa11.14□□□□□ -0.63
RFC4-208ENST00000447345 A0A1W2PS29 197 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 BLACEA4D250 179 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 C17orf105B2RV13 164 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 PYCARD-AS1I3L0S3 204 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 PGRMC2O15173 223 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 ITM2AO43736 263 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 OR10H2O60403 315 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 MAN1A2O60476 641 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 SKAP2O75563 359 aaPredicted RBP11.13□□□□□ -0.63
RFC4-208ENST00000447345 HSPA4LO95757 839 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 CHEK2O96017 543 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 BGNP21810 368 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 TIA1P31483 386 aaKnown RBP eCLIP11.13□□□□□ -0.63
RFC4-208ENST00000447345 SOX11P35716 441 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 TAS2R50P59544 299 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 RAE1P78406 368 aaKnown RBP11.13□□□□□ -0.63
RFC4-208ENST00000447345 ARG2P78540 354 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 SERTAD2Q14140 314 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 NR6A1Q15406 480 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 ELAVL1Q15717 326 aaKnown RBP11.13□□□□□ -0.63
RFC4-208ENST00000447345 SPIN4Q56A73 249 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 ABHD17BQ5VST6 288 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 HHATQ5VTY9 493 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 SLC6A19Q695T7 634 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 JMJD6Q6NYC1 403 aaPredicted RBP11.13□□□□□ -0.63
RFC4-208ENST00000447345 DGAT2L6Q6ZPD8 337 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 CRLF3Q8IUI8 442 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 ZADH2Q8N4Q0 377 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 NFAM1Q8NET5 270 aaPredicted RBP11.13□□□□□ -0.63
RFC4-208ENST00000447345 B3GNT7Q8NFL0 401 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 THAP3Q8WTV1 239 aaPredicted RBP11.13□□□□□ -0.63
RFC4-208ENST00000447345 CHTF18Q8WVB6 975 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 TWIST2Q8WVJ9 160 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 TANKQ92844 425 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 NCLNQ969V3 563 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 ARL8AQ96BM9 186 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 PPWD1Q96BP3 646 aaKnown RBP11.13□□□□□ -0.63
RFC4-208ENST00000447345 TLCD1Q96CP7 247 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 OR8D2Q9GZM6 311 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 ILKAPQ9H0C8 392 aaPredicted RBP11.13□□□□□ -0.63
RFC4-208ENST00000447345 EPN3Q9H201 632 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 ZNF395Q9H8N7 513 aaPredicted RBP11.13□□□□□ -0.63
RFC4-208ENST00000447345 ANKRD10Q9NXR5 420 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 MCM8Q9UJA3 840 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 POLR3HQ9Y535 204 aaPredicted RBP11.13□□□□□ -0.63
RFC4-208ENST00000447345 CLCA3PQ9Y6N3 262 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 EXPH5Q8NEV8 1989 aa11.13□□□□□ -0.63
RFC4-208ENST00000447345 PIP5K1BO14986 540 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 BIRC5O15392 142 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 SUV39H1O43463 412 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 RSL1D1O76021 490 aaKnown RBP11.12□□□□□ -0.63
RFC4-208ENST00000447345 SERPINE1P05121 402 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 IL3P08700 152 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 LINC00032P0C843 101 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 DHRS4L1P0CG22 281 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 COX7A2P14406 83 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 ALOX15P16050 662 aaPredicted RBP11.12□□□□□ -0.63
RFC4-208ENST00000447345 PIK3R1P27986 724 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 PTGER1P34995 402 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 STT3AP46977 705 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 CLCN2P51788 898 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 PLIN5Q00G26 463 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 ZNF750Q32MQ0 723 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 GALNTL6Q49A17 601 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 PRR30Q53SZ7 412 aaPredicted RBP11.12□□□□□ -0.63
RFC4-208ENST00000447345 FAM180BQ6P0A1 224 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 HDXQ7Z353 690 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 ZNF605Q86T29 641 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 BEST3Q8N1M1 668 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 TMEM132CQ8N3T6 1108 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 SLC5A8Q8N695 610 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 ZNF321PQ8N8H1 164 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 OR2T11Q8NH01 316 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 OR14A16Q8NHC5 309 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 ELP5Q8TE02 316 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 TM4SF18Q96CE8 201 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 VMP1Q96GC9 406 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 NPAS2Q99743 824 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 CNPPD1Q9BV87 410 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 TUBB1Q9H4B7 451 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 MAP10Q9P2G4 905 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 VTI1BQ9UEU0 232 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 TEKT2Q9UIF3 430 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 ANAPC2Q9UJX6 822 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 ZNF223Q9UK11 482 aaPredicted RBP11.12□□□□□ -0.63
RFC4-208ENST00000447345 TRAF6Q9Y4K3 522 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 DNAJC15Q9Y5T4 150 aa11.12□□□□□ -0.63
RFC4-208ENST00000447345 SPENQ96T58 3664 aaKnown RBP11.12□□□□□ -0.63
RFC4-208ENST00000447345 SHANK1Q9Y566 2161 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms