RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CHCHD4Q8N4Q1 142 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 PGLYRP2Q96PD5 576 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 HS3ST4Q9Y661 456 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 MYBPHLA2RUH7 354 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 LALBAP00709 142 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SPARCP09486 303 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 C3orf38Q5JPI3 329 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 LYPD8Q6UX82 237 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 GSG1LQ6UXU4 331 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 GPC2Q8N158 579 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ELP4Q96EB1 424 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 TBX5Q99593 518 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 GAL3ST1Q99999 423 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 AIF1LQ9BQI0 150 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 FLRT2O43155 660 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 TBL1XO60907 577 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 RPS17P08708 135 aaKnown RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 SPIN4Q56A73 249 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SYT14Q8NB59 555 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 NAV3Q8IVL0 2385 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ARHGEF28Q8N1W1 1705 aaKnown RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 HRH2P25021 359 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 FOXA1P55317 472 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ZNF674Q2M3X9 581 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 YIF1BQ5BJH7 314 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ZNF534Q76KX8 674 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 KCTD9Q7L273 389 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 HDDC3Q8N4P3 179 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ACVR1CQ8NER5 493 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 WNK1Q9H4A3 2382 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SULT1C2O00338 296 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ARL6IP5O75915 188 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 S100A10P60903 97 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 TREX2Q9BQ50 279 aaPredicted RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 TEX10Q9NXF1 929 aaPredicted RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 LOC102723532A0A0G2JNH3 316 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 A0A1W2PPK0 400 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 RFXAPO00287 272 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SPDEFO95238 335 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SCAPQ12770 1279 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SLIRPQ9GZT3 109 aaKnown RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 OR10H1Q9Y4A9 318 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 PCDHGB7Q9Y5F8 929 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 RIF1Q5UIP0 2472 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 BCL9LQ86UU0 1499 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 FAM72CH0Y354 149 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 CACNG3O60359 315 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 CLEC2LP0C7M8 214 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 EBLN1P0CF75 366 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ACVRL1P37023 503 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 PNLIPRP1P54315 467 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ERVFC1P60507 584 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 XKR4Q5GH76 650 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 FAM72AQ5TYM5 149 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 TNS2Q63HR2 1409 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 FAM72DQ6L9T8 149 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 FAM72BQ86X60 149 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZBED6CLQ96FA7 236 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 YARS2Q9Y2Z4 477 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 MED13LQ71F56 2210 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 A0A1B0GVC2 190 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 A6NIN4 97 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 BEST1O76090 585 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 NKAPLQ5M9Q1 402 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZDHHC20Q5W0Z9 365 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ADGRG2Q8IZP9 1017 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 BEND7Q8N7W2 519 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 KCNJ9Q92806 393 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 MAGEH1Q9H213 219 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 PPP6CO00743 305 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 OAZ2O95190 189 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 TACR2P21452 398 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ERVPABLB-1P60509 514 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 HMGN3Q15651 99 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 CATSPEREQ5SY80 951 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 RIMKLAQ8IXN7 391 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZNF557Q8N988 423 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 OR7D4Q8NG98 312 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 FANK1Q8TC84 345 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 SYT4Q9H2B2 425 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 NOX3Q9HBY0 568 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 MT-ND4P03905 459 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 TGM4P49221 684 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 SERPINA13PQ6UXR4 307 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 NPY6RQ99463 290 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZNF175Q9Y473 711 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 A0A1W2PRB8 838 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 KLHL26Q53HC5 615 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 TOR1AIP1Q5JTV8 583 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 XAF1Q6GPH4 301 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 RPTNQ6XPR3 784 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 DBF4BQ8NFT6 615 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 GPR78Q96P69 363 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZIC5Q96T25 663 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ABCG4Q9H172 646 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 CLEC2DQ9UHP7 191 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 ZNF214Q9UL59 606 aaPredicted RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 PRELID3BQ9Y3B1 194 aa7.55□□□□□ -1.2
SMG1-202ENST00000446231 NOP16Q9Y3C1 178 aaKnown RBP7.55□□□□□ -1.2
SMG1-202ENST00000446231 UPK3BL1B0FP48 263 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms