RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PPM1NQ8N819 430 aa19.19■□□□□ 0.66
CPNE1-219ENST00000440240 SPATA4Q8NEY3 305 aa19.19■□□□□ 0.66
CPNE1-219ENST00000440240 NUBPLQ8TB37 319 aa19.19■□□□□ 0.66
CPNE1-219ENST00000440240 TANKQ92844 425 aa19.19■□□□□ 0.66
CPNE1-219ENST00000440240 RGMAQ96B86 450 aa19.19■□□□□ 0.66
CPNE1-219ENST00000440240 SENP5Q96HI0 755 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-219ENST00000440240 ART5Q96L15 291 aa19.19■□□□□ 0.66
CPNE1-219ENST00000440240 SMC6Q96SB8 1091 aa19.19■□□□□ 0.66
CPNE1-219ENST00000440240 UCK2Q9BZX2 261 aa19.19■□□□□ 0.66
CPNE1-219ENST00000440240 RPF2Q9H7B2 306 aaKnown RBP19.19■□□□□ 0.66
CPNE1-219ENST00000440240 SLC24A3Q9HC58 644 aa19.19■□□□□ 0.66
CPNE1-219ENST00000440240 PNPLA3Q9NST1 481 aa19.19■□□□□ 0.66
CPNE1-219ENST00000440240 C2CD3Q4AC94 2353 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 INTS1Q8N201 2190 aaKnown RBP19.18■□□□□ 0.66
CPNE1-219ENST00000440240 A0A0G2JMM0 328 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 A0A1W2PPB8 328 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 A0A1W2PRS3 328 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 NKX2-6A6NCS4 301 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 FAM90A27PA6NNH2 459 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 KIR3DP1A8MWS1 328 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 SUPT3HB4E1H0 165 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 SH3BGRLO75368 114 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 SUPT3HO75486 399 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 LTA4HP09960 611 aaKnown RBP19.18■□□□□ 0.66
CPNE1-219ENST00000440240 SLC35E2BP0CK96 405 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 PIK3CBP42338 1070 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 MAGEA5P43359 124 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 ARFIP1P53367 373 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 NUP107P57740 925 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 CAV1Q03135 178 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 TFF3Q07654 80 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 FOXO1Q12778 655 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 TBL3Q12788 808 aaKnown RBP19.18■□□□□ 0.66
CPNE1-219ENST00000440240 KBTBD12Q3ZCT8 623 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 SLC22A10Q63ZE4 541 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 TRILQ7L0X0 811 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 GPR180Q86V85 440 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 CCDC71Q8IV32 467 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-219ENST00000440240 RPRMLQ8N4K4 120 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 SLC15A4Q8N697 577 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 OR5M9Q8NGP3 310 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 SLC22A8Q8TCC7 542 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 UBTD2Q8WUN7 234 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 ATOH8Q96SQ7 321 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 OR51B5Q9H339 312 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.18■□□□□ 0.669e-7■□□□□ 11
CPNE1-219ENST00000440240 GRHL1Q9NZI5 618 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 PHF11Q9UIL8 331 aa19.18■□□□□ 0.66
CPNE1-219ENST00000440240 UTP11Q9Y3A2 253 aaKnown RBP19.18■□□□□ 0.66
CPNE1-219ENST00000440240 SYCE1LA8MT33 242 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 SAP18O00422 153 aaKnown RBP19.17■□□□□ 0.66
CPNE1-219ENST00000440240 AQP7O14520 342 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 RAD51CO43502 376 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 FGF17O60258 216 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 ZNF354AO60765 605 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-219ENST00000440240 IGKV3-11P04433 115 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 MSX1P28360 303 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 RAP1GDS1P52306 607 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 PLTPP55058 493 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 RIPPLY3P57055 190 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 ASPHQ12797 758 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 DLG1Q12959 904 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 SLMAPQ14BN4 828 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 GRHL2Q6ISB3 625 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 ZNF585AQ6P3V2 769 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 CCDC91Q7Z6B0 441 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 CMC1Q7Z7K0 106 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 OR4N5Q8IXE1 308 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 DMRTC2Q8IXT2 367 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-219ENST00000440240 OR10Q1Q8NGQ4 319 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 LDAHQ9H6V9 325 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 NPDC1Q9NQX5 325 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-219ENST00000440240 ACAD8Q9UKU7 415 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 ACOT9Q9Y305 439 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 TSC22D4Q9Y3Q8 395 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 ANGPTL3Q9Y5C1 460 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 PCDHGA11Q9Y5H2 935 aa19.17■□□□□ 0.66
CPNE1-219ENST00000440240 ATP6AP2A0A1C7CYW4 349 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 CCDC189A1A4V9 331 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 UBXN8O00124 270 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 ATP6AP2O75787 350 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 FAM155BO75949 473 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 HOXD4P09016 255 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-219ENST00000440240 CCL3P10147 92 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 PTX3P26022 381 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-219ENST00000440240 STX2P32856 288 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 MAGEA4P43358 317 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 DNASE1L1P49184 302 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 MAN2A2P49641 1150 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 PLIN5Q00G26 463 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 NAB1Q13506 487 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 ZNF791Q3KP31 576 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-219ENST00000440240 LIPJQ5W064 366 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 B3GNT6Q6ZMB0 384 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 DND1Q8IYX4 353 aaKnown RBP19.16■□□□□ 0.66
CPNE1-219ENST00000440240 CLYBLQ8N0X4 340 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 ZCCHC7Q8N3Z6 543 aaKnown RBP19.16■□□□□ 0.66
CPNE1-219ENST00000440240 TEX9Q8N6V9 391 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 HUS1BQ8NHY5 278 aa19.16■□□□□ 0.66
CPNE1-219ENST00000440240 RHEBL1Q8TAI7 183 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms