RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 MTERF3Q96E29 417 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 SERINC2Q96SA4 455 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 ZSCAN5AQ9BUG6 496 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 SLC29A3Q9BZD2 475 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 SEC14L4Q9UDX3 406 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 LSM7Q9UK45 103 aaKnown RBP11.8□□□□□ -0.52
TMEM116-202ENST00000437003 POLHQ9Y253 713 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 MYOFQ9NZM1 2061 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 A6NCN8 305 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 BTN3A3O00478 584 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 PRAMEF4O60810 478 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 PDE9AO76083 593 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 SLC2A2P11168 524 aaPredicted RBP11.8□□□□□ -0.52
TMEM116-202ENST00000437003 ZNF250P15622 560 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 CHMP24386 653 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 SDC2P34741 201 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 GNALP38405 381 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 LMAN2Q12907 356 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 GAB1Q13480 694 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 VEZF1Q14119 521 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 FLYWCH1Q4VC44 716 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 DDI2Q5TDH0 399 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 PRAMEF9Q5VWM5 478 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 WDR53Q7Z5U6 358 aaPredicted RBP11.8□□□□□ -0.52
TMEM116-202ENST00000437003 UBTD2Q8WUN7 234 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 ZBED6CLQ96FA7 236 aaPredicted RBP11.8□□□□□ -0.52
TMEM116-202ENST00000437003 RBM14Q96PK6 669 aaKnown RBP11.8□□□□□ -0.52
TMEM116-202ENST00000437003 P2RY13Q9BPV8 354 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.8□□□□□ -0.52
TMEM116-202ENST00000437003 NIPAL2Q9H841 368 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 RDH14Q9HBH5 336 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 PFDN2Q9UHV9 154 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 MAPRE3Q9UPY8 281 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 INSL5Q9Y5Q6 135 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 IQCMA0A1B0GVH7 501 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 SLC35F4A4IF30 521 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 ZNF821O75541 412 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 TSPAN9O75954 239 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 AMD1P17707 334 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 ATF4P18848 351 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 PXNP49023 591 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 SELENOWP63302 87 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 TAGLNQ01995 201 aaKnown RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 CHIT1Q13231 466 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 ZNF267Q14586 743 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 P2RY14Q15391 338 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 TMCO2Q7Z6W1 182 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 Q8N402 240 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 GDPD1Q8N9F7 314 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 OR4C15Q8NGM1 316 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 BTN2A2Q8WVV5 523 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 SLC25A46Q96AG3 418 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 PHF21AQ96BD5 680 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 ZDHHC6Q9H6R6 413 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 PLEKHB1Q9UF11 243 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 PCDHB11Q9Y5F2 797 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 GOLGA4Q13439 2230 aaKnown RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 HYKKA2RU49 373 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 OR7A10O76100 309 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 APOL3O95236 402 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 PDGFAP04085 211 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 ETFAP13804 333 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 ZNF30P17039 623 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 GJA1P17302 382 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 PRPS1L1P21108 318 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 LHCGRP22888 699 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 MAPK1P28482 360 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 SLC9A3P48764 834 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 RAB33AQ14088 237 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 COX20Q5RI15 118 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 FRG2Q64ET8 278 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 ADNP2Q6IQ32 1131 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 SLC51BQ86UW2 128 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 CBARPQ8N350 705 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 OR2AP1Q8NGE2 309 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 MYLIPQ8WY64 445 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 FOXJ1Q92949 421 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 CMTM7Q96FZ5 175 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 MSANTD3Q96H12 275 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 FRG2BQ96QU4 278 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 ACAT2Q9BWD1 397 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 PPIL3Q9H2H8 161 aaKnown RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 MRPL17Q9NRX2 175 aaKnown RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 EVA1BQ9NVM1 165 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 TXNL4BQ9NX01 149 aaKnown RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 CNOT2Q9NZN8 540 aaKnown RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 CFAP97Q9P2B7 532 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 SNX11Q9Y5W9 270 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 SNTNA6NMZ2 147 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 MYL12BO14950 172 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 PSIP1O75475 530 aaKnown RBP11.79□□□□□ -0.52
TMEM116-202ENST00000437003 RECKO95980 971 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 GASTP01350 101 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 MYL12AP19105 171 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 AOAHP28039 575 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 GABRR2P28476 465 aa11.79□□□□□ -0.52
TMEM116-202ENST00000437003 CSNK1DP48730 415 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms