RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 ZNF791Q3KP31 576 aaPredicted RBP12.6□□□□□ -0.39
PTPN7-203ENST00000435759 TMEM35AQ53FP2 167 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 PAGE2BQ5JRK9 111 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 KHDRBS2Q5VWX1 349 aaKnown RBP12.6□□□□□ -0.39
PTPN7-203ENST00000435759 MED27Q6P2C8 311 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 PAOXQ6QHF9 649 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 FAM47EQ6ZV65 393 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 CHSY3Q70JA7 882 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 CDH24Q86UP0 819 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 C9orf40Q8IXQ3 194 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 DMRTC2Q8IXT2 367 aaPredicted RBP12.6□□□□□ -0.39
PTPN7-203ENST00000435759 BBOF1Q8ND07 529 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 SPATA4Q8NEY3 305 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 OR5L2Q8NGL0 311 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 OR5M3Q8NGP4 307 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 OR10Q1Q8NGQ4 319 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 OR8K3Q8NH51 312 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 STAG3L4Q8TBR4 150 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 FBF1Q8TES7 1133 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 NRGNQ92686 78 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 CDKL2Q92772 493 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 TTYH2Q9BSA4 534 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 PHACTR1Q9C0D0 580 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 PRM3Q9NNZ6 103 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 SH2D2AQ9NP31 389 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 TXNDC16Q9P2K2 825 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 MTORP42345 2549 aa12.6□□□□□ -0.39
PTPN7-203ENST00000435759 A0A0G2JNJ9 132 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 HMX2A2RU54 273 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 FAM187AA6NFU0 413 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 GLOD5A6NK44 160 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 K7EPI3 171 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 EIF3HO15372 352 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 EEDO75530 441 aaKnown RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SCELO95171 688 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 LRATO95237 230 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 S100BP04271 92 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 ACVR2AP27037 513 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 MSX1P28360 303 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 HPDP32754 393 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SPRP35270 261 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SSR2P43308 183 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 STT3AP46977 705 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 PLTPP55058 493 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 HNRNPH2P55795 449 aaKnown RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 IGLV3-21P80748 117 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 IRF9Q00978 393 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 FOLH1Q04609 750 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 PCDH1Q08174 1060 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 C2orf54Q08AI8 447 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 DDX39BQ13838 428 aaKnown RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SNTB1Q13884 538 aaKnown RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 RCN2Q14257 317 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 MPEG1Q2M385 716 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 NDUFAF5Q5TEU4 345 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 OPN5Q6U736 354 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 ZDHHC24Q6UX98 284 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 RGS9BPQ6ZS82 235 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 RAPH1Q70E73 1250 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 LRRC70Q7Z2Q7 622 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SLC22A16Q86VW1 577 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 TEX9Q8N6V9 391 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SRFBP1Q8NEF9 429 aaKnown RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 HUS1BQ8NHY5 278 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 CMTM7Q96FZ5 175 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SGCZQ96LD1 299 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SMC6Q96SB8 1091 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 MTERF1Q99551 399 aaKnown RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 ROGDIQ9GZN7 287 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 RPF2Q9H7B2 306 aaKnown RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SACM1LQ9NTJ5 587 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 ALKBH4Q9NXW9 302 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SPRR3Q9UBC9 169 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 Q9UFV3 132 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 ASB4Q9Y574 426 aa12.59□□□□□ -0.39
PTPN7-203ENST00000435759 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.59□□□□□ -0.39
PTPN7-203ENST00000435759 ZNF469Q96JG9 3925 aaPredicted RBP12.58□□□□□ -0.39
PTPN7-203ENST00000435759 VPS13CQ709C8 3753 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 A0A1W2PR48 441 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 A0A1W2PS29 197 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 SUPT3HB4E1H0 165 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 PLPP1O14494 284 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 PROM1O43490 865 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 SUPT3HO75486 399 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 P04436 131 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 HOXD4P09016 255 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-203ENST00000435759 ENDOUP21128 410 aaKnown RBP12.58□□□□□ -0.4
PTPN7-203ENST00000435759 MAGEA4P43358 317 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 NEK2P51955 445 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 RPS13P62277 151 aaKnown RBP12.58□□□□□ -0.4
PTPN7-203ENST00000435759 GUCY2DQ02846 1103 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 CALCOCO2Q13137 446 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 HYAL4Q2M3T9 481 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 SLC22A10Q63ZE4 541 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 TMEM64Q6YI46 380 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 GK5Q6ZS86 529 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 ACAD11Q709F0 780 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 GPR180Q86V85 440 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 CCDC25Q86WR0 208 aa12.58□□□□□ -0.4
PTPN7-203ENST00000435759 FAM109AQ8N4B1 249 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms