RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CD52P31358 61 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 OR1G1P47890 313 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 FABP5Q01469 135 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 TEKQ02763 1124 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 MFSD13AQ14CX5 517 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 AANATQ16613 207 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 RPS26P11Q5JNZ5 115 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 GARNL3Q5VVW2 1013 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 ALG1LQ6GMV1 187 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 BHLHB9Q6PI77 547 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 MSANTD1Q6ZTZ1 278 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 ZNF655Q8N720 491 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 ZBTB44Q8NCP5 570 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 SIPA1Q96FS4 1042 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 SLC6A18Q96N87 628 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 PPP1R3EQ9H7J1 279 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 NUDT15Q9NV35 164 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 DNAJC11Q9NVH1 559 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 CORO2BQ9UQ03 480 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 RUVBL1Q9Y265 456 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 C1orf226A1L170 272 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 LINC00862A6NCI5 91 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 HEPACAM2A8MVW5 462 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 H7C0S8 307 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 K7ERQ8 282 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 MTX2O75431 263 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 ETHE1O95571 254 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 HRGP04196 525 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 OSMP13725 252 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 CCR7P32248 378 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 XCR1P46094 333 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 RPS26P62854 115 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 EXOSC2Q13868 293 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 SF3A2Q15428 464 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 IER5LQ5T953 404 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 HS6ST3Q8IZP7 471 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 OR52I1Q8NGK6 324 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 P2RY13Q9BPV8 354 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 MCOLN1Q9GZU1 580 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 ABCG5Q9H222 651 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 GKN1Q9NS71 199 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 ELF5Q9UKW6 265 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 CLEC4AQ9UMR7 237 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 GPR52Q9Y2T5 361 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 PCDHGB7Q9Y5F8 929 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 ENPP4Q9Y6X5 453 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 TMEM88BA6NKF7 163 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 M0QZQ0 153 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 CHP2O43745 196 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 PRKYO43930 277 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 ACSL4O60488 711 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 RAF1P04049 648 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 TYMPP19971 482 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 PPIBP23284 216 aaKnown RBP11□□□□□ -0.65
HMGCS1-202ENST00000433297 ACRV1P26436 265 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 NNMTP40261 264 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 DCDC1P59894 354 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 TUSC3Q13454 348 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 SEC23BQ15437 767 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 ZSWIM7Q19AV6 140 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 DCST1Q5T197 706 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 MEDAGQ5VYS4 303 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 BICRALQ6AI39 1079 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 BRAT1Q6PJG6 821 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 ARSKQ6UWY0 536 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 IL20RBQ6UXL0 311 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 CEACAM20Q6UY09 585 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 NPLOC4Q8TAT6 608 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 AP2M1Q96CW1 435 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 SGK2Q9HBY8 427 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 EXTL2Q9UBQ6 330 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 ZNF282Q9UDV7 671 aaPredicted RBP11□□□□□ -0.65
HMGCS1-202ENST00000433297 HCN2Q9UL51 889 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 PPIEQ9UNP9 301 aaKnown RBP11□□□□□ -0.65
HMGCS1-202ENST00000433297 PCDHB7Q9Y5E2 793 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 PPP2R3BQ9Y5P8 575 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 CDH10Q9Y6N8 788 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 KCNE1BA0A087WTH5 132 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 PRR23AA6NEV1 266 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 CD8B2A6NJW9 211 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 TRIM77I1YAP6 450 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 DHFRP00374 187 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 F11P03951 625 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 CD8BP10966 210 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 PIPP12273 146 aaPredicted RBP11□□□□□ -0.65
HMGCS1-202ENST00000433297 ATF6P18850 670 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 CXCL3P19876 107 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 IL32P24001 234 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 SOX18P35713 384 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 SRP9P49458 86 aaKnown RBP11□□□□□ -0.65
HMGCS1-202ENST00000433297 EPHA5P54756 1037 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 MRPS6P82932 125 aaKnown RBP11□□□□□ -0.65
HMGCS1-202ENST00000433297 DOC2AQ14183 400 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 GPR176Q14439 515 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 SLC5A12Q1EHB4 618 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 IDNKQ5T6J7 187 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 HMGN2P46Q86SG4 172 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 MARCH9Q86YJ5 346 aa11□□□□□ -0.65
HMGCS1-202ENST00000433297 RBM45Q8IUH3 476 aaKnown RBP11□□□□□ -0.65
HMGCS1-202ENST00000433297 VRK3Q8IV63 474 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms