RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 SGO1Q5FBB7 561 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 SPINK14Q6IE38 97 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 GALNTL5Q7Z4T8 443 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 OR4N5Q8IXE1 308 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 ZNF295-AS1Q8N0V1 137 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 L3MBTL4Q8NA19 623 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 POGLUT1Q8NBL1 392 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 TMEM125Q96AQ2 219 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 VMP1Q96GC9 406 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 FRMD6Q96NE9 622 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 VKORC1Q9BQB6 163 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 CCDC77Q9BR77 488 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 EPB41L4BQ9H329 900 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 ZBTB26Q9HCK0 441 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 TMEM216Q9P0N5 145 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 CLDN16Q9Y5I7 305 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 CLCA3PQ9Y6N3 262 aa14.29□□□□□ -0.12
RPL28-204ENST00000431533 FCHO1O14526 889 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 PRKRAO75569 313 aaKnown RBP14.28□□□□□ -0.12
RPL28-204ENST00000431533 SCELO95171 688 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 RPS17P08708 135 aaKnown RBP14.28□□□□□ -0.12
RPL28-204ENST00000431533 SBK3P0C264 359 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 PYGBP11216 843 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 ZNF24P17028 368 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 TAC1P20366 129 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 CYB561P49447 251 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 HNRNPH2P55795 449 aaKnown RBP14.28□□□□□ -0.12
RPL28-204ENST00000431533 MLF1P58340 268 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 TRAF3Q13114 568 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 NCOA6Q14686 2063 aaPredicted RBP14.28□□□□□ -0.12
RPL28-204ENST00000431533 ELAVL1Q15717 326 aaKnown RBP14.28□□□□□ -0.12
RPL28-204ENST00000431533 MAPKAPK3Q16644 382 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 ZNF468Q5VIY5 522 aaPredicted RBP14.28□□□□□ -0.12
RPL28-204ENST00000431533 FAM219BQ5XKK7 198 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 METTL2BQ6P1Q9 378 aaKnown RBP14.28□□□□□ -0.12
RPL28-204ENST00000431533 CYP20A1Q6UW02 462 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 TIFABQ6ZNK6 161 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 MILR1Q7Z6M3 343 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.28□□□□□ -0.12
RPL28-204ENST00000431533 CDH24Q86UP0 819 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 TMEM132CQ8N3T6 1108 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 APCDD1LQ8NCL9 501 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 CCDC168Q8NDH2 2452 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 OR4F6Q8NGB9 312 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 WDR20Q8TBZ3 569 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 L2HGDHQ9H9P8 463 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 LIN28AQ9H9Z2 209 aaKnown RBP14.28□□□□□ -0.12
RPL28-204ENST00000431533 MCCC2Q9HCC0 563 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 PHF11Q9UIL8 331 aa14.28□□□□□ -0.12
RPL28-204ENST00000431533 ZNF223Q9UK11 482 aaPredicted RBP14.28□□□□□ -0.12
RPL28-204ENST00000431533 FOXO6A8MYZ6 492 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 EEDO75530 441 aaKnown RBP14.27□□□□□ -0.13
RPL28-204ENST00000431533 SLC25A12O75746 678 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 GBAP04062 536 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 SHBGP04278 402 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 SLCO1A2P46721 670 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 TNFRSF17Q02223 184 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 TLE4Q04727 773 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 IFT88Q13099 833 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 FRG2Q64ET8 278 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 C18orf63Q68DL7 685 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 TMEM211Q6ICI0 200 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 SPNS3Q6ZMD2 512 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 C16orf47Q6ZP98 133 aaPredicted RBP14.27□□□□□ -0.13
RPL28-204ENST00000431533 GPR180Q86V85 440 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 TRPC4APQ8TEL6 797 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 DOK4Q8TEW6 326 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 AGAP11Q8TF27 550 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 ZNF483Q8TF39 744 aaPredicted RBP14.27□□□□□ -0.13
RPL28-204ENST00000431533 ASB5Q8WWX0 329 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 FRG2BQ96QU4 278 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 NTMT1Q9BV86 223 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 OR8D2Q9GZM6 311 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 ENKD1Q9H0I2 346 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 TSPAN10Q9H1Z9 355 aaPredicted RBP14.27□□□□□ -0.13
RPL28-204ENST00000431533 ELOVL6Q9H5J4 265 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 RPF2Q9H7B2 306 aaKnown RBP14.27□□□□□ -0.13
RPL28-204ENST00000431533 TSC22D4Q9Y3Q8 395 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 ATG4BQ9Y4P1 393 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 CSMD1Q96PZ7 3565 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 PDZD2O15018 2839 aa14.27□□□□□ -0.13
RPL28-204ENST00000431533 A0A1B0GTL3 188 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 A0A1W2PPM1 405 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 C17orf105B2RV13 164 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 KLRC4-KLRK1H3BQV0 150 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 PPP6CO00743 305 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 FGF17O60258 216 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 PRKNO60260 465 aaPredicted RBP14.26□□□□□ -0.13
RPL28-204ENST00000431533 ITGA10O75578 1167 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 SUPT7LO94864 414 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 OTCP00480 354 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 TLX1P31314 330 aaPredicted RBP14.26□□□□□ -0.13
RPL28-204ENST00000431533 BSGP35613 385 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 BUD31P41223 144 aaPredicted RBP14.26□□□□□ -0.13
RPL28-204ENST00000431533 CUL3Q13618 768 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 SERTAD2Q14140 314 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 TERF2Q15554 542 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 LETMD1Q6P1Q0 360 aa14.26□□□□□ -0.13
RPL28-204ENST00000431533 MEX3BQ6ZN04 569 aaKnown RBP14.26□□□□□ -0.13
RPL28-204ENST00000431533 NUDT13Q86X67 352 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms