RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 LGI4Q8N135 537 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 SMYD1Q8NB12 490 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 DENND6BQ8NEG7 585 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 TMEM19Q96HH6 336 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 ABHD8Q96I13 439 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 AMDHD1Q96NU7 426 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 OR2M4Q96R27 311 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 NIPSNAP1Q9BPW8 284 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 C17orf62Q9BQA9 187 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 RHNO1Q9BSD3 238 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 FUNDC2Q9BWH2 189 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 GLIPR2Q9H4G4 154 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 SLC28A3Q9HAS3 691 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 PLCXD1Q9NUJ7 323 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 FKBP14Q9NWM8 211 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 PSME2Q9UL46 239 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 RNF6Q9Y252 685 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 FANCMQ8IYD8 2048 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 F5P12259 2224 aa13.23□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D3DA0A087WVF3 549 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D3IA0A087WXS9 549 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D3EA0A087X179 549 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D3KA0A087X1G2 549 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D3FA6NER0 549 aaPredicted RBP13.22□□□□□ -0.29
HOXC4-202ENST00000430889 POM121BA6NF01 834 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D3LB9A6J9 549 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 FFAR1O14842 300 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 SEMA7AO75326 666 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 EML2O95834 649 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 MT-ND2P03891 347 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D3HP0C7X1 549 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 SSR2P43308 183 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 MAGEA8P43361 318 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 HSPB3Q12988 150 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 CYP27C1Q4G0S4 372 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TPRG1LQ5T0D9 272 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 SYT6Q5T7P8 510 aaPredicted RBP13.22□□□□□ -0.29
HOXC4-202ENST00000430889 NDUFAF5Q5TEU4 345 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D3GQ6DHY5 549 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D3CQ6IPX1 549 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D3Q8IZP1 549 aaPredicted RBP13.22□□□□□ -0.29
HOXC4-202ENST00000430889 PARP8Q8N3A8 854 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 MFSD9Q8NBP5 474 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
HOXC4-202ENST00000430889 OR1E3Q8WZA6 343 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 YIPF6Q96EC8 236 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 RIPOR3Q96MK2 946 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 KCNC2Q96PR1 638 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 BCL7BQ9BQE9 202 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 CCNB1IP1Q9NPC3 277 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 ZSCAN32Q9NX65 697 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 TBC1D29Q9UFV1 150 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 PCOLCE2Q9UKZ9 415 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 PCDHGA4Q9Y5G9 962 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 HEBP2Q9Y5Z4 205 aa13.22□□□□□ -0.29
HOXC4-202ENST00000430889 A0A0G2JN53 185 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 PDZK1P1A8MUH7 402 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 PCDH17O14917 1159 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 SLC31A1O15431 190 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 GABARAPO95166 117 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 BCHEP06276 602 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 HIST1H1TP22492 207 aaPredicted RBP13.21□□□□□ -0.29
HOXC4-202ENST00000430889 ATP5A1P25705 553 aaKnown RBP13.21□□□□□ -0.29
HOXC4-202ENST00000430889 CCT3P49368 545 aaKnown RBP13.21□□□□□ -0.29
HOXC4-202ENST00000430889 LIM2P55344 173 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 CSNK2BP67870 215 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 NFATC4Q14934 902 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 CTF1Q16619 201 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 TMEM64Q6YI46 380 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 Q6ZPB1 254 aaPredicted RBP13.21□□□□□ -0.29
HOXC4-202ENST00000430889 PRSS48Q7RTY5 328 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 ADCK2Q7Z695 626 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 PAQR7Q86WK9 346 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 OR9Q2Q8NGE9 314 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 RHOXF1Q8NHV9 184 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 FLVCR1-AS1Q8TAF5 88 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 SUN3Q8TAQ9 357 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 DNASE1L2Q92874 299 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 FUZQ9BT04 418 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 SLC35C2Q9NQQ7 365 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 SCN3BQ9NY72 215 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 ACAD8Q9UKU7 415 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 CES1P1Q9UKY3 287 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 HCN4Q9Y3Q4 1203 aa13.21□□□□□ -0.29
HOXC4-202ENST00000430889 A0A1W2PR48 441 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 A6NCN8 305 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 CCDC85CA6NKD9 419 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 NOL3O60936 208 aaKnown RBP13.21□□□□□ -0.3
HOXC4-202ENST00000430889 ZNF182P17025 639 aaPredicted RBP13.21□□□□□ -0.3
HOXC4-202ENST00000430889 MAP2K4P45985 399 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 KCNJ5P48544 419 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 ENTPD1P49961 510 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 CLDN2P57739 230 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 MVKQ03426 396 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 DUSP2Q05923 314 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 CEBPEQ15744 281 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 SDE2Q6IQ49 451 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 GPR153Q6NV75 609 aa13.21□□□□□ -0.3
HOXC4-202ENST00000430889 TRIM69Q86WT6 500 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms