RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 POLR2CP19387 275 aaPredicted RBP11.32□□□□□ -0.6
PTPRN-204ENST00000423636 TGM4P49221 684 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 BTN3A2P78410 334 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 SIM1P81133 766 aaPredicted RBP11.32□□□□□ -0.6
PTPRN-204ENST00000423636 HYAL1Q12794 435 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 EPS8Q12929 822 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 MAD2L1BPQ15013 274 aaPredicted RBP11.32□□□□□ -0.6
PTPRN-204ENST00000423636 DUSP6Q16828 381 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 BCL7AQ4VC05 210 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 CDKL4Q5MAI5 379 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 CCNJQ5T5M9 372 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 TP53I13Q8NBR0 393 aaPredicted RBP11.32□□□□□ -0.6
PTPRN-204ENST00000423636 OR2A1Q8NGT9 310 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 HDAC2Q92769 488 aaKnown RBP11.32□□□□□ -0.6
PTPRN-204ENST00000423636 REPS1Q96D71 796 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 DNAJA3Q96EY1 480 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 CHST8Q9H2A9 424 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 SFXN1Q9H9B4 322 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 CDH7Q9ULB5 785 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 PRRC2CQ9Y520 2896 aaKnown RBP11.32□□□□□ -0.6
PTPRN-204ENST00000423636 GRXCR2A6NFK2 248 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 WWP2O00308 870 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 RNASET2O00584 256 aaKnown RBP11.32□□□□□ -0.6
PTPRN-204ENST00000423636 CASC3O15234 703 aaKnown RBP11.32□□□□□ -0.6
PTPRN-204ENST00000423636 ADAM23O75077 832 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 TYRP1P17643 537 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 PRPH2P23942 346 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 DEFB134Q4QY38 66 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 GPAT3Q53EU6 434 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 IFI44LQ53G44 452 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 C6orf132Q5T0Z8 1188 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 PAQR6Q6TCH4 344 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 SLC16A12Q6ZSM3 486 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 PJA1Q8NG27 643 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 GAS2L1Q99501 681 aaPredicted RBP11.32□□□□□ -0.6
PTPRN-204ENST00000423636 COPS4Q9BT78 406 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 OR51I1Q9H343 314 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 MRPS30Q9NP92 439 aaKnown RBP11.32□□□□□ -0.6
PTPRN-204ENST00000423636 ATAD3AQ9NVI7 634 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 IMPAD1Q9NX62 359 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 MS4A12Q9NXJ0 267 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 DUSP12Q9UNI6 340 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 GPR52Q9Y2T5 361 aa11.32□□□□□ -0.6
PTPRN-204ENST00000423636 ZNF99A8MXY4 864 aaPredicted RBP11.31□□□□□ -0.6
PTPRN-204ENST00000423636 NPIPB8E9PQR5 432 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 UGDHO60701 494 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 NADKO95544 446 aaPredicted RBP11.31□□□□□ -0.6
PTPRN-204ENST00000423636 GRK5P34947 590 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 LIPAP38571 399 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 ERVK-21P61565 698 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 DNASE1L3Q13609 305 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 MED22Q15528 200 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 CCDC85BQ15834 202 aaPredicted RBP11.31□□□□□ -0.6
PTPRN-204ENST00000423636 RASGRP3Q8IV61 690 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 KLHDC8AQ8IYD2 350 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 LAS2Q8IYD9 372 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 C7orf57Q8NEG2 295 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 GPR32P1Q8NGA4 272 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 OR9A2Q8NGT5 310 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 ZNF300Q96RE9 604 aaPredicted RBP11.31□□□□□ -0.6
PTPRN-204ENST00000423636 MS4A8Q9BY19 250 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 GLIPR2Q9H4G4 154 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 SEC14L3Q9UDX4 400 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 UNC13CQ8NB66 2214 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 M0R3G1 203 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 LAMP2P13473 410 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 DDX5P17844 614 aaKnown RBP11.31□□□□□ -0.6
PTPRN-204ENST00000423636 PCMT1P22061 227 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 IGFBP4P22692 258 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 DCKP27707 260 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 MAGEA2P43356 314 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 TRIM40Q6P9F5 258 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 OR52N2Q8NGI0 321 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 OR1E3Q8WZA6 343 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 ALPK1Q96QP1 1244 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 HHIPQ96QV1 700 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 CHCHD6Q9BRQ6 235 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 TPK1Q9H3S4 243 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 SLC6A20Q9NP91 592 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 MKLN1Q9UL63 735 aa11.31□□□□□ -0.6
PTPRN-204ENST00000423636 A0A1W2PR48 441 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 RECKO95980 971 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 CD36P16671 472 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 PEBP1P30086 187 aaKnown RBP11.3□□□□□ -0.6
PTPRN-204ENST00000423636 CNR2P34972 360 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 AVPR1BP47901 424 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 ITGA1P56199 1179 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 NR1D2Q14995 579 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 ITPRIPL2Q3MIP1 535 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 TOR1AIP1Q5JTV8 583 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 FAM46CQ5VWP2 391 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 GTF2IRD2BQ6EKJ0 949 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 GTF2IRD2Q86UP8 949 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 METTL27Q8N6F8 245 aaPredicted RBP11.3□□□□□ -0.6
PTPRN-204ENST00000423636 ZNF557Q8N988 423 aaPredicted RBP11.3□□□□□ -0.6
PTPRN-204ENST00000423636 IL17RCQ8NAC3 791 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 LEMD2Q8NC56 503 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 SLC9A6Q92581 669 aa11.3□□□□□ -0.6
PTPRN-204ENST00000423636 TMEM203Q969S6 136 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms