RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 LMNTD1Q8N9Z9 388 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 TTC29Q8NA56 475 aaPredicted RBP5.36□□□□□ -1.55
LINC00458-201ENST00000423442 TEX19Q8NA77 164 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 TOR1AIP2Q8NFQ8 470 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 OR9A1PQ8NGU1 263 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 OR1L3Q8NH93 324 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 CT55Q8WUE5 264 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 LPGAT1Q92604 370 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 SLCO2A1Q92959 643 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 RERGQ96A58 199 aaPredicted RBP5.36□□□□□ -1.55
LINC00458-201ENST00000423442 FAM136AQ96C01 138 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 VPS39Q96JC1 886 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 BIRC8Q96P09 236 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 KRT12Q99456 494 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 SELENOSQ9BQE4 189 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 KRTAP1-5Q9BYS1 174 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 TRIM31Q9BZY9 425 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 CHRNA10Q9GZZ6 450 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 SPRTNQ9H040 489 aaPredicted RBP5.36□□□□□ -1.55
LINC00458-201ENST00000423442 ACTL8Q9H568 366 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 MRPS30Q9NP92 439 aaKnown RBP5.36□□□□□ -1.55
LINC00458-201ENST00000423442 FBXO6Q9NRD1 293 aaPredicted RBP5.36□□□□□ -1.55
LINC00458-201ENST00000423442 ABCF3Q9NUQ8 709 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 SPHK1Q9NYA1 384 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 EURLQ9NYK6 297 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 IFT80Q9P2H3 777 aaPredicted RBP5.36□□□□□ -1.55
LINC00458-201ENST00000423442 TRMT6Q9UJA5 497 aaKnown RBP5.36□□□□□ -1.55
LINC00458-201ENST00000423442 CDC14AQ9UNH5 594 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 ICKQ9UPZ9 632 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 DHRS7Q9Y394 339 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 UTP11Q9Y3A2 253 aaKnown RBP5.36□□□□□ -1.55
LINC00458-201ENST00000423442 NEU2Q9Y3R4 380 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 PCDHGA6Q9Y5G7 932 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 MDC1Q14676 2089 aaKnown RBP5.36□□□□□ -1.55
LINC00458-201ENST00000423442 HEATR5BQ9P2D3 2071 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 SNRNP200O75643 2136 aaKnown RBP5.36□□□□□ -1.55
LINC00458-201ENST00000423442 ITPR3Q14573 2671 aa5.36□□□□□ -1.55
LINC00458-201ENST00000423442 ZCWPW2A0A1B0GU75 182 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 A0A1W2PS29 197 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 USP27XA6NNY8 438 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 LINC00473A8K010 186 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 VSTM5A8MXK1 200 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 EIF3FO00303 357 aaPredicted RBP5.35□□□□□ -1.55
LINC00458-201ENST00000423442 ZSCAN9O15535 394 aaPredicted RBP5.35□□□□□ -1.55
LINC00458-201ENST00000423442 NIPSNAP2O75323 286 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 RFPL1O75677 317 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CLDN1O95832 211 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 C8GP07360 202 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CHRM2P08172 466 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 MPC1LP0DKB6 136 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 MTHFD2P13995 350 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 MAGP20916 626 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CCND1P24385 295 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 PKLRP30613 574 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 ELK3P41970 407 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CCL11P51671 97 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 ITGA8P53708 1063 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CAV1Q03135 178 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 PDIA2Q13087 525 aaKnown RBP5.35□□□□□ -1.55
LINC00458-201ENST00000423442 GPS2Q13227 327 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 TYSND1Q2T9J0 566 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CD300EQ496F6 205 aaPredicted RBP5.35□□□□□ -1.55
LINC00458-201ENST00000423442 ACSBG2Q5FVE4 666 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 RNASEH2BQ5TBB1 312 aaKnown RBP5.35□□□□□ -1.55
LINC00458-201ENST00000423442 KIAA0408Q6ZU52 694 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 ADCK2Q7Z695 626 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 TRIM73Q86UV7 250 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 DENND6AQ8IWF6 608 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 DNAJC22Q8N4W6 341 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 PYROXD1Q8WU10 500 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 EEF1AKMT1Q8WVE0 214 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CDKL2Q92772 493 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 KCNJ9Q92806 393 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 PTERQ96BW5 349 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 ZBTB9Q96C00 473 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CFAP36Q96G28 342 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 FER1L6-AS2Q96M78 137 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CCDC138Q96M89 665 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 PPM1MQ96MI6 270 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 GPR21Q99679 349 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 DPH7Q9BTV6 452 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 ACAT2Q9BWD1 397 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 PCBD2Q9H0N5 130 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 RAB17Q9H0T7 212 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CHST8Q9H2A9 424 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 PARVBQ9HBI1 364 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 NSMCE4AQ9NXX6 385 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 SPATA7Q9P0W8 599 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CIDEBQ9UHD4 219 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 CDYLQ9Y232 598 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 TP53TG5Q9Y2B4 290 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 MRPS18BQ9Y676 258 aaKnown RBP5.35□□□□□ -1.55
LINC00458-201ENST00000423442 SCN3AQ9NY46 2000 aa5.35□□□□□ -1.55
LINC00458-201ENST00000423442 POLQO75417 2590 aa5.34□□□□□ -1.55
LINC00458-201ENST00000423442 A0A0J9YVX5 310 aa5.34□□□□□ -1.55
LINC00458-201ENST00000423442 HYKKA2RU49 373 aa5.34□□□□□ -1.55
LINC00458-201ENST00000423442 TP73O15350 636 aa5.34□□□□□ -1.55
LINC00458-201ENST00000423442 SLC16A5O15375 505 aa5.34□□□□□ -1.55
LINC00458-201ENST00000423442 TTI1O43156 1089 aa5.34□□□□□ -1.55
LINC00458-201ENST00000423442 PRPF4O43172 522 aaKnown RBP eCLIP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms