RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 HSPB2Q16082 182 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 PDK4Q16654 411 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 HIST2H2ACQ16777 129 aaPredicted RBP15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 PAGE2BQ5JRK9 111 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 HIST2H2AA3Q6FI13 130 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 SULT1C3Q6IMI6 304 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 GPSM1Q86YR5 675 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 ANKMY2Q8IV38 441 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 SLC35F6Q8N357 371 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 LRRC25Q8N386 305 aaPredicted RBP15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 FBXW8Q8N3Y1 598 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 SNX31Q8N9S9 440 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 SLC22A8Q8TCC7 542 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 ESAMQ96AP7 390 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 RMND5BQ96G75 393 aaPredicted RBP15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 MCMBPQ9BTE3 642 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 MS4A8Q9BY19 250 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 ZNF703Q9H7S9 590 aaPredicted RBP15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 ZFP64Q9NPA5 681 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 ACKR4Q9NPB9 350 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 QPCTLQ9NXS2 382 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 NSMCE4AQ9NXX6 385 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 CRIM1Q9NZV1 1036 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 BOKQ9UMX3 212 aaPredicted RBP15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 SNX12Q9UMY4 172 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 NINQ8N4C6 2090 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 NAV3Q8IVL0 2385 aa15.54■□□□□ 0.08
UPF3AP3-201ENST00000420996 FREM3P0C091 2139 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 PROM1O43490 865 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 SCELO95171 688 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 WISP3O95389 354 aaPredicted RBP15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 IGKV3-11P04433 115 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 RFPL3SP0C7P2 107 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 HIST1H1TP22492 207 aaPredicted RBP15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 CPN2P22792 545 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 UQCRC1P31930 480 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 CASP2P42575 452 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 STT3AP46977 705 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 SLC12A2P55011 1212 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 KCNJ2P63252 427 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 POU4F1Q01851 419 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 IRF8Q02556 426 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 BIKQ13323 160 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 TBCCQ15814 346 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 AP5B1Q2VPB7 878 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 TMEM35AQ53FP2 167 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 FBXO48Q5FWF7 155 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 LYPD8Q6UX82 237 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 SYDE1Q6ZW31 735 aaPredicted RBP15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 C9orf40Q8IXQ3 194 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 ULK2Q8IYT8 1036 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 DND1Q8IYX4 353 aaKnown RBP15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 GOT1L1Q8NHS2 421 aaPredicted RBP15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 NEIL3Q8TAT5 605 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 ZNF473Q8WTR7 871 aaKnown RBP15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 FAM222BQ8WU58 562 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 SPACA9Q96E40 222 aaPredicted RBP15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 RBM18Q96H35 190 aaKnown RBP15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 PROK2Q9HC23 129 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 RYDENQ9NUL5 291 aaKnown RBP15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 CNIH4Q9P003 139 aa15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 PTBP2Q9UKA9 531 aaKnown RBP15.53■□□□□ 0.08
UPF3AP3-201ENST00000420996 A6NNC1 897 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 RTCAO00442 366 aaKnown RBP15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 DYRK3O43781 588 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 FGF17O60258 216 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 FAM155BO75949 473 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 CCDC166P0CW27 439 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 EPORP19235 508 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 MSH2P43246 934 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 FOXD4Q12950 439 aaPredicted RBP15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 CHIT1Q13231 466 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 E2F2Q14209 437 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 FLYWCH1Q4VC44 716 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 SEM1Q6ZVN7 128 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 CHSY3Q70JA7 882 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 CDC20BQ86Y33 519 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 OR4N5Q8IXE1 308 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 SPATA6LQ8N4H0 392 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 RELL2Q8NC24 303 aaPredicted RBP15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 PDPRQ8NCN5 879 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 BBOF1Q8ND07 529 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 FBXO36Q8NEA4 188 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 LRRC46Q96FV0 321 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 ART5Q96L15 291 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 DGAT2Q96PD7 388 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 ALPK1Q96QP1 1244 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 PHACTR1Q9C0D0 580 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 CD274Q9NZQ7 290 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 PLEKHA6Q9Y2H5 1048 aa15.52■□□□□ 0.08
UPF3AP3-201ENST00000420996 LRRC3CA6NJW4 275 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 AHRRA9YTQ3 701 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 DVL2O14641 736 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 FOSL1P15407 271 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 SERPINB3P29508 390 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 CEACAM8P31997 349 aaPredicted RBP15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 SSR2P43308 183 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 ASCL1P50553 236 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 PDIA2Q13087 525 aaKnown RBP15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 OR4D1Q15615 310 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms