RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 NEK10Q6ZWH5 1172 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 VN1R5Q7Z5H4 357 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 MMAAQ8IVH4 418 aaKnown RBP11.31□□□□□ -0.6
LIMK1-202ENST00000418310 LAX1Q8IWV1 398 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 ADGRF3Q8IZF5 1079 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 GPR32P1Q8NGA4 272 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 NUS1Q96E22 293 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 RC3H2Q9HBD1 1191 aaKnown RBP11.31□□□□□ -0.6
LIMK1-202ENST00000418310 ABCB9Q9NP78 766 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 IL20RAQ9UHF4 553 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 BOLA1Q9Y3E2 137 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 CCRL2O00421 344 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 CCNKO75909 580 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 SNX4O95219 450 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 PCCBP05166 539 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 ARAFP10398 606 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 SLC6A11P48066 632 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 DGKGP49619 791 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 DCST1Q5T197 706 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 NXNL2Q5VZ03 156 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 REEP3Q6NUK4 255 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 CASP12Q6UXS9 341 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 SLC39A5Q6ZMH5 540 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 CAMKK1Q8N5S9 505 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 JPH3Q8WXH2 748 aaPredicted RBP11.31□□□□□ -0.6
LIMK1-202ENST00000418310 LRRC3BQ96PB8 259 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 POLR2J3Q9H1A7 115 aaKnown RBP11.31□□□□□ -0.6
LIMK1-202ENST00000418310 SLC23A2Q9UGH3 650 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 PCDHGA3Q9Y5H0 932 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 PDZK1P1A8MUH7 402 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 KRT75O95678 551 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 CH25HO95992 272 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 CSF2P04141 144 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 CBLP22681 906 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 XKP51811 444 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 WDR5P61964 334 aaKnown RBP11.31□□□□□ -0.6
LIMK1-202ENST00000418310 HOXC5Q00444 222 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 MAP4K2Q12851 820 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 ZNF630Q2M218 657 aaPredicted RBP11.31□□□□□ -0.6
LIMK1-202ENST00000418310 CLEC12AQ5QGZ9 265 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 CCDC149Q6ZUS6 474 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 C6orf120Q7Z4R8 191 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 NRARPQ7Z6K4 114 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 COMTD1Q86VU5 262 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 DENND6BQ8NEG7 585 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 MAGEB10Q96LZ2 347 aaPredicted RBP11.31□□□□□ -0.6
LIMK1-202ENST00000418310 TRNT1Q96Q11 434 aaKnown RBP11.31□□□□□ -0.6
LIMK1-202ENST00000418310 PSD2Q9BQI7 771 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 ZBP1Q9H171 429 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 KLHL20Q9Y2M5 609 aa11.31□□□□□ -0.6
LIMK1-202ENST00000418310 PRRT4C9JH25 899 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 NPIPB8E9PQR5 432 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 OR1F1O43749 312 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 B4GALT2O60909 372 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 SOD1P00441 154 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 IFNA14P01570 189 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 APOA1P02647 267 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 TNFSF8P32971 234 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 IRS1P35568 1242 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 BUD31P41223 144 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-202ENST00000418310 LRIT3Q3SXY7 679 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 ANKRD53Q8N9V6 530 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 POP5Q969H6 163 aaKnown RBP11.3□□□□□ -0.6
LIMK1-202ENST00000418310 ARSGQ96EG1 525 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 OPALINQ96PE5 141 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 C17orf62Q9BQA9 187 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 TRMT61BQ9BVS5 477 aaKnown RBP11.3□□□□□ -0.6
LIMK1-202ENST00000418310 UCK2Q9BZX2 261 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 NOTCH4Q99466 2003 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 A0A1W2PS29 197 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 COQ9O75208 318 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 CSO75390 466 aaKnown RBP11.3□□□□□ -0.6
LIMK1-202ENST00000418310 NR2F1P10589 423 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 EPCAMP16422 314 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 CSNK2BP67870 215 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 OR2G6Q5TZ20 316 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 PLAG1Q6DJT9 500 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 TCTN3Q6NUS6 607 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 DPPA4Q7L190 304 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 C12orf76Q8N812 135 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-202ENST00000418310 SYT14Q8NB59 555 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.3□□□□□ -0.65e-8■■■□□ 17.3
LIMK1-202ENST00000418310 TFGQ92734 400 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-202ENST00000418310 ARRDC3Q96B67 414 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 ARMC5Q96C12 935 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 ZNF689Q96CS4 500 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-202ENST00000418310 DTD2Q96FN9 168 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 TSSK6Q9BXA6 273 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 FTSJ1Q9UET6 329 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 MUTYHQ9UIF7 546 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 HAT1O14929 419 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 PDPK1O15530 556 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 HOXB3P14651 431 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-202ENST00000418310 RHCEP18577 417 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 SLC15A1P46059 708 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 ALDH6A1Q02252 535 aaKnown RBP11.3□□□□□ -0.6
LIMK1-202ENST00000418310 EEF1A2Q05639 463 aaKnown RBP11.3□□□□□ -0.6
LIMK1-202ENST00000418310 IRF3Q14653 427 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 ARMC4Q5T2S8 1044 aa11.3□□□□□ -0.6
LIMK1-202ENST00000418310 PNCKQ6P2M8 343 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms