RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 AGFG2O95081 481 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 NADKO95544 446 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 KLK1P06870 262 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 ATP5F1P24539 256 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 SERPINB1P30740 379 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 SOX18P35713 384 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 SOX3P41225 446 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 HK2P52789 917 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 ERVK-8P63133 956 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 RAE1P78406 368 aaKnown RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 OC90Q02509 493 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 TGM3Q08188 693 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 UBAP2LQ14157 1087 aaKnown RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 ELAVL1Q15717 326 aaKnown RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 NNATQ16517 81 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 ERCC6LQ2NKX8 1250 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 AP5B1Q2VPB7 878 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 TTC19Q6DKK2 380 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 NIPAL1Q6NVV3 410 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 ZCCHC23Q6ZST2 131 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 MDGA2Q7Z553 956 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 SLC5A8Q8N695 610 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 C1orf52Q8N6N3 182 aaKnown RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 ZNF721Q8TF20 911 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 SELENOMQ8WWX9 145 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 NR4A3Q92570 626 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 HAS2Q92819 552 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 RGMAQ96B86 450 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 L3HYPDHQ96EM0 354 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 APIPQ96GX9 242 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 LMF1Q96S06 567 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 NTMT1Q9BV86 223 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 CNPPD1Q9BV87 410 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 ALOXE3Q9BYJ1 711 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 SLC17A7Q9P2U7 560 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 FETUBQ9UGM5 382 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 ERVK-19Q9WJR5 959 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 MRPS33Q9Y291 106 aaKnown RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 TSC22D4Q9Y3Q8 395 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 PCDHGA11Q9Y5H2 935 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 TNPO3Q9Y5L0 923 aaKnown RBP9.5□□□□□ -0.89
HDLBP-206ENST00000417540 LIPGQ9Y5X9 500 aa9.5□□□□□ -0.89
HDLBP-206ENST00000417540 CELSR2Q9HCU4 2923 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 PGRMC2O15173 223 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 NME2P1O60361 137 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 OR2J2O76002 312 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 SEMA3DO95025 777 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 SLU7O95391 586 aaKnown RBP9.49□□□□□ -0.89
HDLBP-206ENST00000417540 OTCP00480 354 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 IGKV3-11P04433 115 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 FAM58BPP0C7Q3 252 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 KRT15P19012 456 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 NME2P22392 152 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 SSTR4P31391 388 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 ARRB2P32121 409 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 STT3AP46977 705 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 CLCN2P51788 898 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 PRKAA2P54646 552 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 TAS2R50P59544 299 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 PHEXP78562 749 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 STX4Q12846 297 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 LCP2Q13094 533 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 IFT88Q13099 833 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 TERF2Q15554 542 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 PRSS53Q2L4Q9 553 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 CES4AQ5XG92 561 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 CLEC6AQ6EIG7 209 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 FRMD7Q6ZUT3 714 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 GPRIN3Q6ZVF9 776 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 FGD2Q7Z6J4 655 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 MILR1Q7Z6M3 343 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.49□□□□□ -0.89
HDLBP-206ENST00000417540 GPR180Q86V85 440 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 RPS19BP1Q86WX3 136 aaKnown RBP9.49□□□□□ -0.89
HDLBP-206ENST00000417540 TDRPQ86YL5 185 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 C10orf107Q8IVU9 208 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 SIAH3Q8IW03 269 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 CHERPQ8IWX8 916 aaKnown RBP9.49□□□□□ -0.89
HDLBP-206ENST00000417540 CYP4Z2PQ8N1L4 340 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 METTL4Q8N3J2 472 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 CCNYL1Q8N7R7 359 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 BCORP1Q8N888 145 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 ST6GALNAC3Q8NDV1 305 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 ARMC2Q8NEN0 867 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 OR14A16Q8NHC5 309 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 ACMSDQ8TDX5 336 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 FAR1Q8WVX9 515 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 APOPT1Q96IL0 206 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 ZNF354BQ96LW1 612 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 DGAT2Q96PD7 388 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 GAL3ST4Q96RP7 486 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 RASL10BQ96S79 203 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 UTP23Q9BRU9 249 aaKnown RBP9.49□□□□□ -0.89
HDLBP-206ENST00000417540 ELOVL6Q9H5J4 265 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 RPF2Q9H7B2 306 aaKnown RBP9.49□□□□□ -0.89
HDLBP-206ENST00000417540 DDX31Q9H8H2 851 aaKnown RBP9.49□□□□□ -0.89
HDLBP-206ENST00000417540 ANKRA2Q9H9E1 313 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 LYARQ9NX58 379 aaKnown RBP9.49□□□□□ -0.89
HDLBP-206ENST00000417540 STMN3Q9NZ72 180 aa9.49□□□□□ -0.89
HDLBP-206ENST00000417540 LRFN1Q9P244 771 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms