RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CTPS2Q9NRF8 586 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 CCDC59Q9P031 241 aaKnown RBP13.77□□□□□ -0.21
HDAC9-208ENST00000417496 TAC3Q9UHF0 121 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 PLXNA2O75051 1894 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 EFCAB10A6NFE3 127 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 TLR4O00206 839 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 PSMD11O00231 422 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 MFN2O95140 757 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 MAPK12P53778 367 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 MADCAM1Q13477 382 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 SF3B4Q15427 424 aaKnown RBP eCLIP13.77□□□□□ -0.21
HDAC9-208ENST00000417496 LRIT3Q3SXY7 679 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 FAM46DQ8NEK8 389 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 OR5D16Q8NGK9 328 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 ZNF717Q9BY31 904 aaPredicted RBP13.77□□□□□ -0.21
HDAC9-208ENST00000417496 MVB12BQ9H7P6 319 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 NFKBIL1Q9UBC1 381 aaPredicted RBP13.77□□□□□ -0.21
HDAC9-208ENST00000417496 SLC23A2Q9UGH3 650 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 TBX21Q9UL17 535 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 MAFFQ9ULX9 164 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 PEX16Q9Y5Y5 336 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 CKAP5Q14008 2032 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 PNMA8CA0A1B0GUJ8 204 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 LOC110117498-PIK3R3F6TDL0 507 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 H7BY64 318 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 APOL3O95236 402 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 C6P13671 934 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 ACADLP28330 430 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 TNFSF8P32971 234 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 SOX6P35712 828 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 MXD1Q05195 221 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 ZNF77Q15935 545 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 TCEANCQ8N8B7 351 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 PLA2G15Q8NCC3 412 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 SLC6A18Q96N87 628 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 PRAP1Q96NZ9 151 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 UCK2Q9BZX2 261 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 SAGE1Q9NXZ1 904 aa13.76□□□□□ -0.21
HDAC9-208ENST00000417496 PRRT4C9JH25 899 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 ANHXE9PGG2 379 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 LRRTM2O43300 516 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 LZTS3O60299 673 aaPredicted RBP13.75□□□□□ -0.21
HDAC9-208ENST00000417496 AZGP1P25311 298 aaKnown RBP13.75□□□□□ -0.21
HDAC9-208ENST00000417496 ELAVL4P26378 380 aaKnown RBP13.75□□□□□ -0.21
HDAC9-208ENST00000417496 SLC15A1P46059 708 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 DGKGP49619 791 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 TARDBPQ13148 414 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC9-208ENST00000417496 ELOAQ14241 798 aaKnown RBP13.75□□□□□ -0.21
HDAC9-208ENST00000417496 SYPL1Q16563 259 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 SPDYE7PQ495Y7 208 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 C19orf48Q6RUI8 117 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 C6orf120Q7Z4R8 191 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 CCDC190Q86UF4 302 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 FAM129CQ86XR2 697 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 CACUL1Q86Y37 369 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 GPR65Q8IYL9 337 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 OR8H2Q8N162 312 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 SLC7A13Q8TCU3 470 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 TMEM203Q969S6 136 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 ARRDC3Q96B67 414 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 TM4SF18Q96CE8 201 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 NUS1Q96E22 293 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 ZFYVE19Q96K21 471 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 CEP19Q96LK0 163 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 TAPBPLQ9BX59 468 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 ASPNQ9BXN1 380 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 SNTG1Q9NSN8 517 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 FBXL12Q9NXK8 326 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 SPATA7Q9P0W8 599 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 MUTYHQ9UIF7 546 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 KCND3Q9UK17 655 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 TMCC3Q9ULS5 477 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 A3GALT2U3KPV4 340 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 NOTCH4Q99466 2003 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 A0A0C4DFX4 3053 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 ABHD14A-ACY1A0A1B0GW23 586 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 PRAMEF27A3QJZ7 478 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 SMIM30A4D0T7 59 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 A8MVJ9 347 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 HMGN4O00479 90 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 AP3D1O14617 1153 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 COQ9O75208 318 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 PAPLNO95428 1278 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 SRPRAP08240 638 aaKnown RBP13.75□□□□□ -0.21
HDAC9-208ENST00000417496 DDCP20711 480 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 PPM1AP35813 382 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 RPL3P39023 403 aaKnown RBP13.75□□□□□ -0.21
HDAC9-208ENST00000417496 DHCR24Q15392 516 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 DCST1Q5T197 706 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 KIAA0907Q7Z7F0 614 aaPredicted RBP13.75□□□□□ -0.21
HDAC9-208ENST00000417496 C11orf96Q7Z7L8 435 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 FBXO15Q8NCQ5 510 aaPredicted RBP13.75□□□□□ -0.21
HDAC9-208ENST00000417496 TXNDC15Q96J42 360 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 MACROD1Q9BQ69 325 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 SERHL2Q9H4I8 314 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 KCNK12Q9HB15 430 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 SLC25A19Q9HC21 320 aa13.75□□□□□ -0.21
HDAC9-208ENST00000417496 PAK6Q9NQU5 681 aaPredicted RBP13.75□□□□□ -0.21
HDAC9-208ENST00000417496 TEX10Q9NXF1 929 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms