RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 CYC1P08574 325 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 NEFHP12036 1026 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 BUD31P41223 144 aaPredicted RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 ALDH9A1P49189 494 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 ARFIP1P53367 373 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 SOX8P57073 446 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 ABCE1P61221 599 aaKnown RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 DUSP2Q05923 314 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 ACSM2AQ08AH3 577 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 BST1Q10588 318 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 STX4Q12846 297 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 NR6A1Q15406 480 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 PRSS53Q2L4Q9 553 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 NADK2Q4G0N4 442 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 SPDYAQ5MJ70 313 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 NDUFAF5Q5TEU4 345 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 VWA5B1Q5TIE3 1220 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 HHATQ5VTY9 493 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 ACSM2BQ68CK6 577 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 PLAG1Q6DJT9 500 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 TCTN3Q6NUS6 607 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 C16orf47Q6ZP98 133 aaPredicted RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 Q6ZSR9 355 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 ASB18Q6ZVZ8 466 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 TRIM46Q7Z4K8 759 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 DDIASQ8IXT1 998 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 KBTBD2Q8IY47 623 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 ZNF843Q8N446 348 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 RBMXL3Q8N7X1 1067 aaKnown RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 GBP7Q8N8V2 638 aaPredicted RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 NFAM1Q8NET5 270 aaPredicted RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 CDC26Q8NHZ8 85 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 DNAJB14Q8TBM8 379 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 TM4SF18Q96CE8 201 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 C11orf24Q96F05 449 aaPredicted RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 VPS50Q96JG6 964 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 ATP6V1G3Q96LB4 118 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 PPP1R36Q96LQ0 422 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 C3orf30Q96M34 536 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 SMAD5Q99717 465 aaKnown RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 LHPPQ9H008 270 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 KCNK13Q9HB14 408 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 ADAP2Q9NPF8 381 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 LYARQ9NX58 379 aaKnown RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 MCM8Q9UJA3 840 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 TUBD1Q9UJT1 453 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 ADAM29Q9UKF5 820 aa7.21□□□□□ -1.26
CPSF4-202ENST00000412686 MRPS33Q9Y291 106 aaKnown RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 PCDHGA9Q9Y5G4 932 aaKnown RBP7.21□□□□□ -1.26
CPSF4-202ENST00000412686 GNG14A0A1W2PPG7 69 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 SERTM1A2A2V5 107 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 A8MUI8 341 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 C17orf105B2RV13 164 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 TMEM114B3SHH9 223 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 SLC28A1O00337 649 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 PCDH17O14917 1159 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 PRKNO60260 465 aaPredicted RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 RSL1D1O76021 490 aaKnown RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 FGF4P08620 206 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 IL3P08700 152 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 TNNI3P19429 210 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 TACR1P25103 407 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 TLX1P31314 330 aaPredicted RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 SOX11P35716 441 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 SERPINB5P36952 375 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 SLC1A6P48664 564 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 TAS2R50P59544 299 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 RPL38P63173 70 aaKnown RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 IGLV3-21P80748 117 aaPredicted RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 ZNF33BQ06732 778 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 STX3Q13277 289 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 KIAA0040Q15053 153 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 PDCD2Q16342 344 aaPredicted RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 GALNTL6Q49A17 601 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 RFTN2Q52LD8 501 aaPredicted RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 SPIN4Q56A73 249 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 IRAK1BP1Q5VVH5 260 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 OR52E8Q6IFG1 317 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 PAGE2Q7Z2X7 111 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 CRLF3Q8IUI8 442 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 CLYBLQ8N0X4 340 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 APCDD1LQ8NCL9 501 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 LSM14AQ8ND56 463 aaKnown RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 CATSPER1Q8NEC5 780 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 ELP5Q8TE02 316 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 C16orf78Q8WTQ4 265 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 THAP3Q8WTV1 239 aaPredicted RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 PTPMT1Q8WUK0 201 aaPredicted RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 NCLNQ969V3 563 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 EGLN2Q96KS0 407 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 PRR14Q9BWN1 585 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 OR8D2Q9GZM6 311 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 VIPAS39Q9H9C1 493 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 LIN28AQ9H9Z2 209 aaKnown RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 LRTM1Q9HBL6 345 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 EML4Q9HC35 981 aaKnown RBP7.2□□□□□ -1.26
CPSF4-202ENST00000412686 MMP25Q9NPA2 562 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 PNPOQ9NVS9 261 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 NMRK1Q9NWW6 199 aa7.2□□□□□ -1.26
CPSF4-202ENST00000412686 MS4A12Q9NXJ0 267 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms