RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 SIRT3Q9NTG7 399 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-206ENST00000409754 NCDNQ9UBB6 729 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 GMEB2Q9UKD1 530 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 FBXW2Q9UKT8 454 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 POMT2Q9UKY4 750 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 DOLKQ9UPQ8 538 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 MAP4K5Q9Y4K4 846 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 ATG4BQ9Y4P1 393 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 ASCC3Q8N3C0 2202 aaKnown RBP13.33□□□□□ -0.28
LIMS2-206ENST00000409754 A0A1B0GTW7 788 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 PDLIM1O00151 329 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 P2RX6O15547 441 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 PROM1O43490 865 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 GDF9O60383 454 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 ZNF682O95780 498 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 AIFM1O95831 613 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 CST1P01037 141 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 SEMG1P04279 462 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 NTSP30990 170 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 GTF2A1P52655 376 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-206ENST00000409754 MAZP56270 477 aaKnown RBP13.32□□□□□ -0.28
LIMS2-206ENST00000409754 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.28
LIMS2-206ENST00000409754 EEF1A2Q05639 463 aaKnown RBP13.32□□□□□ -0.28
LIMS2-206ENST00000409754 HSPB3Q12988 150 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 ELOAQ14241 798 aaKnown RBP13.32□□□□□ -0.28
LIMS2-206ENST00000409754 ZNF630Q2M218 657 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-206ENST00000409754 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.32□□□□□ -0.28
LIMS2-206ENST00000409754 MANEAQ5SRI9 462 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 C6orf52Q5T4I8 152 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 KLHL35Q6PF15 583 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 C17orf82Q86X59 251 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-206ENST00000409754 ZNF761Q86XN6 746 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-206ENST00000409754 SLC30A8Q8IWU4 369 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 ARL14Q8N4G2 192 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 ZFP28Q8NHY6 868 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 MAL2Q969L2 176 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 RERGQ96A58 199 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-206ENST00000409754 AMDHD1Q96NU7 426 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 SEMA6CQ9H3T2 930 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 GLIPR2Q9H4G4 154 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 SNX8Q9Y5X2 465 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 SPTBN4Q9H254 2564 aa13.32□□□□□ -0.28
LIMS2-206ENST00000409754 LILRA5A6NI73 299 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 MYO1GB0I1T2 1018 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 H0YGG7 62 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 ZSCAN9O15535 394 aaPredicted RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 AQP9O43315 295 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 NOBOXO60393 691 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 LYNP07948 512 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 ARAFP10398 606 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 PVRP15151 417 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 ZNF23P17027 643 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 ZNF10P21506 573 aaPredicted RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 PRIM2P49643 509 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CDK9P50750 372 aaKnown RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 ARF3P61204 181 aaPredicted RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 SCARB2Q14108 478 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CSRP2Q16527 193 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 NHSL2Q5HYW2 709 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 SLC48A1Q6P1K1 146 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CCDC80Q76M96 950 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 ABHD13Q7L211 337 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 ZNF655Q8N720 491 aaPredicted RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 N4BP2L2Q92802 583 aaPredicted RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 TMBIM1Q969X1 311 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 SERINC2Q96SA4 455 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 KLHL25Q9H0H3 589 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 IL21RQ9HBE5 538 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 IL1RAPQ9NPH3 570 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 ADPRHL2Q9NX46 363 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CES1P1Q9UKY3 287 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 SNX11Q9Y5W9 270 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 LOC105369274A0A096LPK9 316 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 LOC102723532A0A0G2JNH3 316 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 LMO7DNF2Z398 122 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 DLGAP1O14490 977 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CDX4O14627 284 aaPredicted RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 EI24O14681 340 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 PGRMC2O15173 223 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 LRP3O75074 770 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 PRKRAO75569 313 aaKnown RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 UBXN7O94888 489 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CFIP05156 583 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 UBTFL6P0CB48 400 aaPredicted RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 TYRP1P17643 537 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CTSKP43235 329 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 AFF3P51826 1226 aaKnown RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 NCBP2P52298 156 aaKnown RBP eCLIP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CRYBA2P53672 197 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CASP9P55211 416 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 DSTNP60981 165 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 TXNL4AP83876 142 aaKnown RBP13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CDK6Q00534 326 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 BIRC2Q13490 618 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 MYBPC3Q14896 1274 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 SHBQ15464 509 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 CEBPEQ15744 281 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 SPDYE7PQ495Y7 208 aa13.31□□□□□ -0.28
LIMS2-206ENST00000409754 C18orf63Q68DL7 685 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms