RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TGFBR1P36897 503 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 WASP42768 502 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 CRISP1P54107 249 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 DMPKQ09013 629 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 INAQ16352 499 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 ZNF770Q6IQ21 691 aaPredicted RBP15.98■□□□□ 0.15
NUP50-203ENST00000407019 INSM2Q96T92 566 aaPredicted RBP15.98■□□□□ 0.15
NUP50-203ENST00000407019 DCSTAMPQ9H295 470 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 ANKHQ9HCJ1 492 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 MS4A12Q9NXJ0 267 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 TMCC3Q9ULS5 477 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 LCMT2O60294 686 aaKnown RBP15.98■□□□□ 0.15
NUP50-203ENST00000407019 CLEC3AO75596 197 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 ADAP00813 363 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 SERPIND1P05546 499 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 ADORA3P0DMS8 318 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 BMP4P12644 408 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 CHMP24386 653 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 UGT2B10P36537 528 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 CCT3P49368 545 aaKnown RBP15.98■□□□□ 0.15
NUP50-203ENST00000407019 TRA2BP62995 288 aaKnown RBP15.98■□□□□ 0.15
NUP50-203ENST00000407019 ST3GAL4Q11206 333 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 TP53BP2Q13625 1128 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 MLC1Q15049 377 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 AGERQ15109 404 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 FBXO43Q4G163 708 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 OR4C11Q6IEV9 310 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 KIAA1161Q6NSJ0 714 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 NIPAL1Q6NVV3 410 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 SLC46A3Q7Z3Q1 461 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 RSPH9Q9H1X1 276 aaPredicted RBP15.98■□□□□ 0.15
NUP50-203ENST00000407019 MTIF3Q9H2K0 278 aaKnown RBP15.98■□□□□ 0.15
NUP50-203ENST00000407019 PHPT1Q9NRX4 125 aaPredicted RBP15.98■□□□□ 0.15
NUP50-203ENST00000407019 DAPK2Q9UIK4 370 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.98■□□□□ 0.15
NUP50-203ENST00000407019 SNX11Q9Y5W9 270 aa15.98■□□□□ 0.15
NUP50-203ENST00000407019 PLXND1Q9Y4D7 1925 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 A0A0A6YYD5 115 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 TRBV4-1A0A0J9YWV2 114 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 FUOMA2VDF0 154 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 TMEM247A6NEH6 219 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 ANHXE9PGG2 379 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 GADD45AP24522 165 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 TEAD1P28347 426 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 SSR2P43308 183 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 TUBA1BP68363 451 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 IRF3Q14653 427 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 MAPK11Q15759 364 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 MLF2Q15773 248 aaPredicted RBP15.97■□□□□ 0.15
NUP50-203ENST00000407019 TRIM16LQ309B1 348 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 FRMPD2BQ6IN97 320 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 FAM92BQ6ZTR7 304 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 TUBA1AQ71U36 451 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 NLGN4XQ8N0W4 816 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 HDDC3Q8N4P3 179 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 B3GNT7Q8NFL0 401 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 PSMA8Q8TAA3 256 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 CRELD1Q96HD1 420 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 ZNF354BQ96LW1 612 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 CAMK1GQ96NX5 476 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 ZNF607Q96SK3 696 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 TMEM106CQ9BVX2 250 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 SERGEFQ9UGK8 458 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 SLC6A14Q9UN76 642 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 CHD7Q9P2D1 2997 aa15.97■□□□□ 0.15
NUP50-203ENST00000407019 A0A0G2JN53 185 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 SH3D21A4FU49 640 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 EFCAB10A6NFE3 127 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 FAM227AF5H4B4 570 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 SLC28A2O43868 658 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 PTHP01270 115 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 CA3P07451 260 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 DRD2P14416 443 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 CNR2P34972 360 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 TRIM23P36406 574 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 KCNJ5P48544 419 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 RAB28P51157 221 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 BCAP31P51572 246 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 PRDX1Q06830 199 aaKnown RBP15.96■□□□□ 0.15
NUP50-203ENST00000407019 DUSP6Q16828 381 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 AMER3Q8N944 861 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 TTLQ8NG68 377 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 C9orf43Q8TAL5 461 aaPredicted RBP15.96■□□□□ 0.15
NUP50-203ENST00000407019 CREB3L4Q8TEY5 395 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 RASSF5Q8WWW0 418 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 UCN3Q969E3 161 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 SLC35G5Q96KT7 338 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 TEFMQ96QE5 360 aaKnown RBP15.96■□□□□ 0.15
NUP50-203ENST00000407019 RAB11FIP5Q9BXF6 653 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 MROQ9BYG7 248 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 SERHL2Q9H4I8 314 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 XKR8Q9H6D3 395 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 ZBTB20Q9HC78 741 aaPredicted RBP15.96■□□□□ 0.15
NUP50-203ENST00000407019 IMP3Q9NV31 184 aaKnown RBP15.96■□□□□ 0.15
NUP50-203ENST00000407019 CLN6Q9NWW5 311 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 WBP1LQ9NX94 342 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 TAS2R7Q9NYW3 318 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 P2RX2Q9UBL9 471 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 C2orf16Q68DN1 1984 aa15.96■□□□□ 0.15
NUP50-203ENST00000407019 KIAA0100Q14667 2235 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms