RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 INTS9Q9NV88 658 aaKnown RBP3.46□□□□□ -1.86
FNDC3A-202ENST00000398316 OPTCQ9UBM4 332 aa3.46□□□□□ -1.86
FNDC3A-202ENST00000398316 RNF112Q9ULX5 631 aa3.46□□□□□ -1.86
FNDC3A-202ENST00000398316 TRIM33Q9UPN9 1127 aa3.46□□□□□ -1.86
FNDC3A-202ENST00000398316 SH3GLB1Q9Y371 365 aa3.46□□□□□ -1.86
FNDC3A-202ENST00000398316 A0A087WV48 116 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 A0A1W2PNU3 283 aaPredicted RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 TCRBV3S1A0A5B6 114 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 CCDC78A2IDD5 438 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 TMEM247A6NEH6 219 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 PLPP1O14494 284 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ACOT8O14734 319 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ACOX3O15254 700 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ITM2AO43736 263 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 DUX1O43812 170 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 PCCBP05166 539 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 THBS1P07996 1170 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ATP5A1P25705 553 aaKnown RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 SERPINB3P29508 390 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 EEF1DP29692 281 aaKnown RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 CAPZA2P47755 286 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 COX10Q12887 443 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 SF3B4Q15427 424 aaKnown RBP eCLIP3.45□□□□□ -1.863e-6■■■■□ 25.7
FNDC3A-202ENST00000398316 MPEG1Q2M385 716 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 PTCHD3Q3KNS1 767 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ZNF362Q5T0B9 420 aaPredicted RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 FRA10AC1Q70Z53 315 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ZC3H7AQ8IWR0 971 aaKnown RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 PTGR2Q8N8N7 351 aaPredicted RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 FAM46DQ8NEK8 389 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 OR5AR1Q8NGP9 310 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 LMX1AQ8TE12 382 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 DNAJC9Q8WXX5 260 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 GATA6Q92908 595 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 CCT8L2Q96SF2 557 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 KCNS3Q9BQ31 491 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ACTR5Q9H9F9 607 aaPredicted RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 COPS7BQ9H9Q2 264 aaPredicted RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 PLSCR2Q9NRY7 297 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 UCKL1Q9NWZ5 548 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 NKIRAS1Q9NYS0 192 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 NDUFAF1Q9Y375 327 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ARHGAP21Q5T5U3 1957 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 A0A1B0GTL3 188 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 LOC102725191A0A1B0GVB3 256 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 A0A1B0GVC2 190 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 HYAL3O43820 417 aaPredicted RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 NKX2-2O95096 273 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 BMP10O95393 424 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 CPNE6O95741 557 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 KRT6AP02538 564 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 KRT6BP04259 564 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 SLC35E2P0CK97 266 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 PRDX3P30048 256 aaKnown RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 KRT6CP48668 564 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 SUMO3P55854 103 aaPredicted RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 STXBP1P61764 594 aaKnown RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 IFFO1Q0D2I5 559 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 TCEA2Q15560 299 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 NDUFA9Q16795 377 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ISXQ2M1V0 245 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 AKIRIN2Q53H80 203 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 MROH9Q5TGP6 573 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 RNLSQ5VYX0 342 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 PAOXQ6QHF9 649 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 NHLRC1Q6VVB1 395 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ASPGQ86U10 573 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 RAB43Q86YS6 212 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 TTC29Q8NA56 475 aaPredicted RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 TWIST2Q8WVJ9 160 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 UTP4Q969X6 686 aaKnown RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 COL26A1Q96A83 441 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 NRBF2Q96F24 287 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 TSSK3Q96PN8 268 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 WDR77Q9BQA1 342 aaPredicted RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 SLC6A17Q9H1V8 727 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 RNF122Q9H9V4 155 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 MMP25Q9NPA2 562 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 SLC13A4Q9UKG4 626 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 INVSQ9Y283 1065 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 CRYL1Q9Y2S2 319 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 MKI67P46013 3256 aaKnown RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 CFAP73A6NFT4 308 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 URADA6NGE7 173 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 CENPBD1B2RD01 187 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 HNRNPRO43390 633 aaKnown RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 JUNDP17535 347 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 DRD5P21918 477 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 ZNF763Q0D2J5 394 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 MERTKQ12866 999 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 TMEM154Q6P9G4 183 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 PGAM4Q8N0Y7 254 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 OR5P2Q8WZ92 322 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 SGF29Q96ES7 293 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 APOL2Q9BQE5 337 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 WRAP53Q9BUR4 548 aaKnown RBP3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 RAD21L1Q9H4I0 556 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 CAB39LQ9H9S4 337 aa3.45□□□□□ -1.86
FNDC3A-202ENST00000398316 DUSP22Q9NRW4 184 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms