RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 HORMAD2Q8N7B1 307 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 PHF10Q8WUB8 498 aaKnown RBP22.6■■□□□ 1.21
PABPN1-202ENST00000397276 PROX1Q92786 737 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 RAB7BQ96AH8 199 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 MTERF3Q96E29 417 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 MS4A8Q9BY19 250 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 ACOT13Q9NPJ3 140 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 NOX1Q9Y5S8 564 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 TRBC2A0A5B9 178 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 PTGER1P34995 402 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 CCR8P51685 355 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 SEC13P55735 322 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 MVKQ03426 396 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 CST6Q15828 149 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 ZNF630Q2M218 657 aaPredicted RBP22.6■■□□□ 1.21
PABPN1-202ENST00000397276 FAM46CQ5VWP2 391 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 POC5Q8NA72 575 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 MCFD2Q8NI22 146 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 TEX10Q9NXF1 929 aaPredicted RBP22.6■■□□□ 1.21
PABPN1-202ENST00000397276 ARAFP10398 606 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 CD36P16671 472 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 UQCRC2P22695 453 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 SOX9P48436 509 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 PPP5CP53041 499 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 MICAQ29983 383 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 SYT6Q5T7P8 510 aaPredicted RBP22.59■■□□□ 1.21
PABPN1-202ENST00000397276 STEAP3Q658P3 488 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 NLGN4XQ8N0W4 816 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 PITX2Q99697 317 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 KXD1Q9BQD3 176 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 MENTQ9BUN1 341 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 CAB39Q9Y376 341 aaPredicted RBP22.59■■□□□ 1.21
PABPN1-202ENST00000397276 A0A1W2PPV9 198 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 FAM227AF5H4B4 570 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 DNAJB5O75953 348 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 DLGAP3O95886 979 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 SPDYE7PQ495Y7 208 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 GANCQ8TET4 914 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 WDR26Q9H7D7 661 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 SLC6A14Q9UN76 642 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 ANGPT4Q9Y264 503 aa22.59■■□□□ 1.21
PABPN1-202ENST00000397276 TMPRSS11DO60235 418 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 ST13P50502 369 aaKnown RBP22.58■■□□□ 1.21
PABPN1-202ENST00000397276 LRIT3Q3SXY7 679 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 CRB2Q5IJ48 1285 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 IKBIPQ70UQ0 350 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 CCDC80Q76M96 950 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 CCDC103Q8IW40 242 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 OR4C15Q8NGM1 316 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 ZHX1-C8orf76Q96EF9 292 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 INSM2Q96T92 566 aaPredicted RBP22.58■■□□□ 1.21
PABPN1-202ENST00000397276 GABARAPL3Q9BY60 117 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 MARCH7Q9H992 704 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 LHX9Q9NQ69 397 aa22.58■■□□□ 1.21
PABPN1-202ENST00000397276 DPM1O60762 260 aa22.58■■□□□ 1.2
PABPN1-202ENST00000397276 RPN2P04844 631 aa22.58■■□□□ 1.2
PABPN1-202ENST00000397276 FGL2Q14314 439 aa22.58■■□□□ 1.2
PABPN1-202ENST00000397276 IRF4Q15306 451 aa22.58■■□□□ 1.2
PABPN1-202ENST00000397276 NANOGNBQ7Z5D8 188 aa22.58■■□□□ 1.2
PABPN1-202ENST00000397276 GEMIN6Q8WXD5 167 aaKnown RBP22.58■■□□□ 1.2
PABPN1-202ENST00000397276 SMPDL3AQ92484 453 aa22.58■■□□□ 1.2
PABPN1-202ENST00000397276 COPS4Q9BT78 406 aa22.58■■□□□ 1.2
PABPN1-202ENST00000397276 ACER3Q9NUN7 267 aa22.58■■□□□ 1.2
PABPN1-202ENST00000397276 OR52A4PA6NMU1 304 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 C5orf58C9J3I9 102 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 CAPN5O15484 640 aaPredicted RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 PDPK1O15530 556 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 TGFBR2P37173 567 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 COL9A2Q14055 689 aaPredicted RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 YAF2Q8IY57 180 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 SLC38A5Q8WUX1 472 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 EFHD2Q96C19 240 aaPredicted RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 C6orf62Q9GZU0 229 aaPredicted RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 RHBGQ9H310 441 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 SFXN1Q9H9B4 322 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 KLHL3Q9UH77 587 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 GLOD5A6NK44 160 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 EFCAB9A8MZ26 197 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 SNPHO15079 494 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 KMOO15229 486 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 PRKRAO75569 313 aaKnown RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 UPK1BO75841 260 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 GADD45GO95257 159 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 MAT2AP31153 395 aaKnown RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 PCBP3P57721 371 aaKnown RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 TP53BP2Q13625 1128 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 HEPACAMQ14CZ8 416 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 MLF2Q15773 248 aaPredicted RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 SOWAHCQ53LP3 525 aaPredicted RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 C9orf50Q5SZB4 431 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 AKAP14Q86UN6 197 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 OTUB1Q96FW1 271 aaPredicted RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 SLC6A17Q9H1V8 727 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 RNF167Q9H6Y7 350 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 OSGIN1Q9UJX0 560 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 NUP210Q8TEM1 1887 aaPredicted RBP22.57■■□□□ 1.2
PABPN1-202ENST00000397276 MYO9BQ13459 2157 aa22.57■■□□□ 1.2
PABPN1-202ENST00000397276 B4GALT2O60909 372 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 ITGA2P17301 1181 aa22.56■■□□□ 1.2
PABPN1-202ENST00000397276 CXCR2P25025 360 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms