RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 PROK2Q9HC23 129 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 CNIH4Q9P003 139 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 ARID1AO14497 2285 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 COL6A5A8TX70 2615 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 MBD3L4A6NDZ8 208 aaPredicted RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 MBD3L3A6NE82 208 aaPredicted RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 MBD3L5A6NJ08 208 aaPredicted RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 INAFM1C9JVW0 142 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 CES2O00748 559 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 SMPD2O60906 423 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 H2AFYO75367 372 aaKnown RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 CLEC3AO75596 197 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 ETHE1O95571 254 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 IL18BPO95998 194 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 FGGP02679 453 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 C1GALT1C1LP0DN25 315 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 PTMSP20962 102 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 GDF1P27539 372 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 CERS1P27544 350 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 GABRB3P28472 473 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 HPDP32754 393 aaPredicted RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 OPRM1P35372 400 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 MAGEA3P43357 314 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 MTTPP55157 894 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 PRSS57Q6UWY2 283 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 DND1Q8IYX4 353 aaKnown RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 AGGF1Q8N302 714 aaeCLIP13.74□□□□□ -0.21
SEC13-206ENST00000397102 MBD3L2Q8NHZ7 208 aaPredicted RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 GABPB2Q8TAK5 448 aaPredicted RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 SIGLEC10Q96LC7 697 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 Q96MF0 132 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 JSRP1Q96MG2 331 aaPredicted RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 REXO4Q9GZR2 422 aaKnown RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 COPS7BQ9H9Q2 264 aaPredicted RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 RYDENQ9NUL5 291 aaKnown RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 ADAM21Q9UKJ8 722 aa13.74□□□□□ -0.21
SEC13-206ENST00000397102 CHCHD2Q9Y6H1 151 aaPredicted RBP13.74□□□□□ -0.21
SEC13-206ENST00000397102 CD8B2A6NJW9 211 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 GOLGA8MH3BSY2 632 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 SMAD7O15105 426 aaKnown RBP13.73□□□□□ -0.21
SEC13-206ENST00000397102 LDB3O75112 727 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 TBX6O95947 436 aaPredicted RBP13.73□□□□□ -0.21
SEC13-206ENST00000397102 C1QAP02745 245 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 CCDC175P0C221 793 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 GNAZP19086 355 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 AGFG1P52594 562 aaKnown RBP13.73□□□□□ -0.21
SEC13-206ENST00000397102 SLBPQ14493 270 aaKnown RBP eCLIP13.73□□□□□ -0.21
SEC13-206ENST00000397102 PPP1R3AQ16821 1122 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 ABHD17CQ6PCB6 329 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 SLCO4C1Q6ZQN7 724 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 TMEM139Q8IV31 216 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 C9orf40Q8IXQ3 194 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 C7orf57Q8NEG2 295 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 PIGTQ969N2 578 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 ISL2Q96A47 359 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 ZNF597Q96LX8 424 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 DOHHQ9BU89 302 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 NT5DC2Q9H857 520 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 HOMER3Q9NSC5 361 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 IKZF3Q9UKT9 509 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 CNOT11Q9UKZ1 510 aaKnown RBP13.73□□□□□ -0.21
SEC13-206ENST00000397102 TLN2Q9Y4G6 2542 aa13.73□□□□□ -0.21
SEC13-206ENST00000397102 SH3D21A4FU49 640 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 ANKDD1BA6NHY2 528 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 KRT14P02533 472 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 AHSGP02765 367 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 COX7A2P14406 83 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 VASNQ6EMK4 673 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 KRT78Q8N1N4 520 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 FAM13CQ8NE31 585 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 OR10G3Q8NGC4 313 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 PDLIM5Q96HC4 596 aaKnown RBP13.72□□□□□ -0.21
SEC13-206ENST00000397102 TRIB1Q96RU8 372 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 RBM24Q9BX46 236 aaKnown RBP13.72□□□□□ -0.21
SEC13-206ENST00000397102 PITHD1Q9GZP4 211 aaPredicted RBP13.72□□□□□ -0.21
SEC13-206ENST00000397102 LYRM4Q9HD34 91 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 CAMK2AQ9UQM7 478 aa13.72□□□□□ -0.21
SEC13-206ENST00000397102 EIF3LQ9Y262 564 aaKnown RBP13.72□□□□□ -0.21
SEC13-206ENST00000397102 TRIM3O75382 744 aaPredicted RBP13.71□□□□□ -0.21
SEC13-206ENST00000397102 ERN1O75460 977 aaKnown RBP13.71□□□□□ -0.21
SEC13-206ENST00000397102 IGKV3-11P04433 115 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 FBXO45P0C2W1 286 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 SERPINB3P29508 390 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 PGGT1BP53609 377 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 CDKL1Q00532 357 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 TGM3Q08188 693 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 CRYMQ14894 314 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 NHSL2Q5HYW2 709 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 TBCELQ5QJ74 424 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 SYDE1Q6ZW31 735 aaPredicted RBP13.71□□□□□ -0.21
SEC13-206ENST00000397102 VN1R5Q7Z5H4 357 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 YTHDF3Q7Z739 585 aaKnown RBP13.71□□□□□ -0.21
SEC13-206ENST00000397102 GALNT7Q86SF2 657 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 CNTN4Q8IWV2 1026 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 ANKRD9Q96BM1 317 aaPredicted RBP13.71□□□□□ -0.21
SEC13-206ENST00000397102 NTNG2Q96CW9 530 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 SENP5Q96HI0 755 aaPredicted RBP13.71□□□□□ -0.21
SEC13-206ENST00000397102 ART5Q96L15 291 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 CALHM2Q9HA72 323 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 PRDM7Q9NQW5 492 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms