RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MMP21Q8N119 569 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 NFAM1Q8NET5 270 aaPredicted RBP15.49■□□□□ 0.07
CXCL1-201ENST00000395761 BRIX1Q8TDN6 353 aaKnown RBP15.49■□□□□ 0.07
CXCL1-201ENST00000395761 TANKQ92844 425 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 TM4SF18Q96CE8 201 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 SORT1Q99523 831 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 RAP2CQ9Y3L5 183 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 CCL27Q9Y4X3 112 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 DNAJC15Q9Y5T4 150 aa15.49■□□□□ 0.07
CXCL1-201ENST00000395761 SMG1Q96Q15 3661 aaKnown RBP15.48■□□□□ 0.07
CXCL1-201ENST00000395761 TNRC6AQ8NDV7 1962 aaKnown RBP15.48■□□□□ 0.07
CXCL1-201ENST00000395761 KALRNO60229 2985 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 HSPA4LO95757 839 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 LINC00032P0C843 101 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 BUD31P41223 144 aaPredicted RBP15.48■□□□□ 0.07
CXCL1-201ENST00000395761 GYS2P54840 703 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 SLC26A5P58743 744 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 ACSM2AQ08AH3 577 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 COLEC12Q5KU26 742 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 VWA5B1Q5TIE3 1220 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 ACSM2BQ68CK6 577 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 Q6ZSR9 355 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 SIRT6Q8N6T7 355 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 OR2T11Q8NH01 316 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 C11orf24Q96F05 449 aaPredicted RBP15.48■□□□□ 0.07
CXCL1-201ENST00000395761 C7orf26Q96N11 449 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 ILKAPQ9H0C8 392 aaPredicted RBP15.48■□□□□ 0.07
CXCL1-201ENST00000395761 VTI1BQ9UEU0 232 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 MCM8Q9UJA3 840 aa15.48■□□□□ 0.07
CXCL1-201ENST00000395761 G3BP2Q9UN86 482 aaKnown RBP15.48■□□□□ 0.07
CXCL1-201ENST00000395761 SAGE2PA6NJ88 616 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 EIF4E1BA6NMX2 242 aaKnown RBP15.47■□□□□ 0.07
CXCL1-201ENST00000395761 A8MUI8 341 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 PCDH7O60245 1069 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 MYO1DO94832 1006 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 IFNA16P05015 189 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 TIA1P31483 386 aaKnown RBP eCLIP15.47■□□□□ 0.07
CXCL1-201ENST00000395761 CD97P48960 835 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 IGLV3-21P80748 117 aaPredicted RBP15.47■□□□□ 0.07
CXCL1-201ENST00000395761 FOLH1Q04609 750 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 EXT1Q16394 746 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 IMPG1Q17R60 797 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 SPIN4Q56A73 249 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 NDUFAF5Q5TEU4 345 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 AGAP7PQ5VUJ5 663 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 IRAK1BP1Q5VVH5 260 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 B3GNTL1Q67FW5 361 aaPredicted RBP15.47■□□□□ 0.07
CXCL1-201ENST00000395761 DGAT2L6Q6ZPD8 337 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 ZNF843Q8N446 348 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 KIF2BQ8N4N8 673 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 BOD1L1Q8NFC6 3051 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 M1APQ8TC57 530 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 PTPMT1Q8WUK0 201 aaPredicted RBP15.47■□□□□ 0.07
CXCL1-201ENST00000395761 TWIST2Q8WVJ9 160 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 PPWD1Q96BP3 646 aaKnown RBP15.47■□□□□ 0.07
CXCL1-201ENST00000395761 AGAP4Q96P64 663 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 EBPLQ9BY08 206 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 MMP25Q9NPA2 562 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 PTGFRNQ9P2B2 879 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 ZNF451Q9Y4E5 1061 aa15.47■□□□□ 0.07
CXCL1-201ENST00000395761 DOCK10Q96BY6 2186 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 CFAP46Q8IYW2 2715 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 GNG14A0A1W2PPG7 69 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 A0A1W2PS29 197 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 TCP11X1B4DZS4 312 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 SLC28A1O00337 649 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 PIP5K1BO14986 540 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 RSL1D1O76021 490 aaKnown RBP15.46■□□□□ 0.07
CXCL1-201ENST00000395761 GPR75O95800 540 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 CHEK2O96017 543 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 SOX11P35716 441 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 GPR143P51810 404 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 SERTAD2Q14140 314 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 FCRLBQ6BAA4 426 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 JMJD6Q6NYC1 403 aaPredicted RBP15.46■□□□□ 0.07
CXCL1-201ENST00000395761 GALNT18Q6P9A2 607 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 LINC00696Q6ZRV3 163 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 RNF165Q6ZSG1 346 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 DDIASQ8IXT1 998 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 DNAJB14Q8TBM8 379 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 DOK4Q8TEW6 326 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 C16orf78Q8WTQ4 265 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 ZNF317Q96PQ6 595 aaPredicted RBP15.46■□□□□ 0.07
CXCL1-201ENST00000395761 MFRPQ9BY79 579 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 WDR41Q9HAD4 459 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 SLCO1B3Q9NPD5 702 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 ADAP2Q9NPF8 381 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 SIRT5Q9NXA8 310 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 C5AR2Q9P296 337 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 HEY2Q9UBP5 337 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 ADAM21Q9UKJ8 722 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 CES1P1Q9UKY3 287 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 PCDHGB7Q9Y5F8 929 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 PCDHA9Q9Y5H5 950 aa15.46■□□□□ 0.07
CXCL1-201ENST00000395761 RGS14O43566 566 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 MAN1A2O60476 641 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 EDF1O60869 148 aaKnown RBP15.45■□□□□ 0.06
CXCL1-201ENST00000395761 GUCY1B2O75343 617 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 SEC22BO75396 215 aa15.45■□□□□ 0.06
CXCL1-201ENST00000395761 ALPPP05187 535 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms