RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SEM1Q6ZVN7 128 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 UBE3DQ7Z6J8 389 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 LRRC8AQ8IWT6 810 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 OR4N5Q8IXE1 308 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 SLC22A8Q8TCC7 542 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 SENP5Q96HI0 755 aaPredicted RBP19.46■□□□□ 0.71
TRAF4-203ENST00000394925 ALPK1Q96QP1 1244 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 OSBPL9Q96SU4 736 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 ROGDIQ9GZN7 287 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 SH2D2AQ9NP31 389 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 ZFP64Q9NPA5 681 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 DMRT3Q9NQL9 472 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 TRMT1Q9NXH9 659 aaKnown RBP19.46■□□□□ 0.71
TRAF4-203ENST00000394925 BOKQ9UMX3 212 aaPredicted RBP19.46■□□□□ 0.71
TRAF4-203ENST00000394925 TEX264Q9Y6I9 313 aa19.46■□□□□ 0.71
TRAF4-203ENST00000394925 SH3BGRLO75368 114 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 FAM155BO75949 473 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 COX7A2P14406 83 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 CD22P20273 847 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 ATP5A1P25705 553 aaKnown RBP19.45■□□□□ 0.7
TRAF4-203ENST00000394925 IVDP26440 423 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 TRPC1P48995 793 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 ADAM8P78325 824 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 ANKMY2Q8IV38 441 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 C9orf40Q8IXQ3 194 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 TCAIMQ8N3R3 496 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 FBXW8Q8N3Y1 598 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 LIX1Q8N485 282 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 SPATA6LQ8N4H0 392 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 ACOT4Q8N9L9 421 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 NUBPLQ8TB37 319 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 PAQR8Q8TEZ7 354 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 PTCD3Q96EY7 689 aaKnown RBP19.45■□□□□ 0.7
TRAF4-203ENST00000394925 VPS39Q96JC1 886 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 JSRP1Q96MG2 331 aaPredicted RBP19.45■□□□□ 0.7
TRAF4-203ENST00000394925 DGAT2Q96PD7 388 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 CNOT10Q9H9A5 744 aaKnown RBP19.45■□□□□ 0.7
TRAF4-203ENST00000394925 CBLCQ9ULV8 474 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 RPH3AQ9Y2J0 694 aaPredicted RBP19.45■□□□□ 0.7
TRAF4-203ENST00000394925 SPACA6W5XKT8 324 aa19.45■□□□□ 0.7
TRAF4-203ENST00000394925 DVL2O14641 736 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 FGF17O60258 216 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 FOSL1P15407 271 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 CPN2P22792 545 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 GGT5P36269 586 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 STT3AP46977 705 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 ASCL1P50553 236 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 MORF4L2Q15014 288 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 LYPD8Q6UX82 237 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 NAXEQ8NCW5 288 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 FAM13CQ8NE31 585 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 SRFBP1Q8NEF9 429 aaKnown RBP19.44■□□□□ 0.7
TRAF4-203ENST00000394925 NEIL3Q8TAT5 605 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 FAM222BQ8WU58 562 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 RNASE6Q93091 150 aaKnown RBP19.44■□□□□ 0.7
TRAF4-203ENST00000394925 PPWD1Q96BP3 646 aaKnown RBP19.44■□□□□ 0.7
TRAF4-203ENST00000394925 LRRC39Q96DD0 335 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 SPACA9Q96E40 222 aaPredicted RBP19.44■□□□□ 0.7
TRAF4-203ENST00000394925 WDR34Q96EX3 536 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 LRRC46Q96FV0 321 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 SH3GL2Q99962 352 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 TBCDQ9BTW9 1192 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 EFCAB11Q9BUY7 163 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 DERL2Q9GZP9 239 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 PROK2Q9HC23 129 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 ACKR4Q9NPB9 350 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 PCDHGB3Q9Y5G1 929 aa19.44■□□□□ 0.7
TRAF4-203ENST00000394925 LRRC3CA6NJW4 275 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 HRKO00198 91 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 STK16O75716 305 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 LRATO95237 230 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 HIST1H1TP22492 207 aaPredicted RBP19.43■□□□□ 0.7
TRAF4-203ENST00000394925 MSH2P43246 934 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 SLC12A2P55011 1212 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 WNT3P56703 355 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 FRG1Q14331 258 aaKnown RBP19.43■□□□□ 0.7
TRAF4-203ENST00000394925 PDK4Q16654 411 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 HIST2H2ACQ16777 129 aaPredicted RBP19.43■□□□□ 0.7
TRAF4-203ENST00000394925 PAGE2BQ5JRK9 111 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 HIST2H2AA3Q6FI13 130 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 DGAT2L6Q6ZPD8 337 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 GPSM1Q86YR5 675 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 LRRC25Q8N386 305 aaPredicted RBP19.43■□□□□ 0.7
TRAF4-203ENST00000394925 TNIP2Q8NFZ5 429 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 OR10G3Q8NGC4 313 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 DOK4Q8TEW6 326 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 MS4A8Q9BY19 250 aa19.43■□□□□ 0.7
TRAF4-203ENST00000394925 KDM4EB2RXH2 506 aaPredicted RBP19.42■□□□□ 0.7
TRAF4-203ENST00000394925 DYRK3O43781 588 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 IGKV3-11P04433 115 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 IRF8Q02556 426 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 TBL3Q12788 808 aaKnown RBP19.42■□□□□ 0.7
TRAF4-203ENST00000394925 CHIT1Q13231 466 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 LAPTM5Q13571 262 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 AP5B1Q2VPB7 878 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 FBXW10Q5XX13 1052 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 SULT1C3Q6IMI6 304 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 PAMR1Q6UXH9 720 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 CAMKMTQ7Z624 323 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 SLC15A4Q8N697 577 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms