RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 HSPA13P48723 471 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 FNTBP49356 437 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 VAC14Q08AM6 782 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 RUNX2Q13950 521 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 ATP6AP1Q15904 470 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 TRIM40Q6P9F5 258 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 IKBIPQ70UQ0 350 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 WDR53Q7Z5U6 358 aaPredicted RBP14.16□□□□□ -0.14
MKS1-202ENST00000393119 HORMAD2Q8N7B1 307 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 AVL9Q8NBF6 648 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 KCNC2Q96PR1 638 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 NELL2Q99435 816 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 SARGQ9BW04 601 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 PITHD1Q9GZP4 211 aaPredicted RBP14.16□□□□□ -0.14
MKS1-202ENST00000393119 SERHL2Q9H4I8 314 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 C1GALT1Q9NS00 363 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 KLHL3Q9UH77 587 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 DOLKQ9UPQ8 538 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 SCN2AQ99250 2005 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 KIR2DS5A0A0G2JLQ3 304 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 A0A0G2JNG1 304 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 A0A1B0GVT2 93 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 KIR2DS3K7RE56 304 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 KDM1AO60341 852 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 NOBOXO60393 691 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 TNFRSF21O75509 655 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 CST1P01037 141 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 UMPSP11172 480 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 ATP6V1B1P15313 513 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 PRKAG1P54619 331 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 VSX2P58304 361 aaPredicted RBP14.16□□□□□ -0.14
MKS1-202ENST00000393119 CBX3Q13185 183 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 KIR2DS5Q14953 304 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 LTB4RQ15722 352 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 GPR19Q15760 415 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 ZIK1Q3SY52 487 aaPredicted RBP14.16□□□□□ -0.14
MKS1-202ENST00000393119 MRM1Q6IN84 353 aaKnown RBP14.16□□□□□ -0.14
MKS1-202ENST00000393119 TTLQ8NG68 377 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 OR5D16Q8NGK9 328 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 KLHL6Q8WZ60 621 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 TWSG1Q9GZX9 223 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 SMURF2Q9HAU4 748 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 ANKMY1Q9P2S6 941 aa14.16□□□□□ -0.14
MKS1-202ENST00000393119 SH3PXD2BA1X283 911 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 OR5K3A6NET4 321 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 C2orf74A8MZ97 194 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 CCNDBP1O95273 360 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 YAP1P46937 504 aaKnown RBP14.15□□□□□ -0.14
MKS1-202ENST00000393119 OR1E2P47887 323 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 BLKP51451 505 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 GFERP55789 205 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 SIM1P81133 766 aaPredicted RBP14.15□□□□□ -0.14
MKS1-202ENST00000393119 VLDLRP98155 873 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 SMYD1Q8NB12 490 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 CADM4Q8NFZ8 388 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 SUN3Q8TAQ9 357 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 SLC22A18Q96BI1 424 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 PYURFQ96I23 114 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 ZNF597Q96LX8 424 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 EPS8L2Q9H6S3 715 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 SLC9B1P1A6NJY1 282 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 FAM227AF5H4B4 570 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 H0YJX3 145 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 TOR1BO14657 336 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 PROM1O43490 865 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 TNFSF14O43557 240 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 MED26O95402 600 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 SERPINB1P30740 379 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 NCBP2P52298 156 aaKnown RBP eCLIP14.15□□□□□ -0.14
MKS1-202ENST00000393119 HNRNPFP52597 415 aaKnown RBP14.15□□□□□ -0.14
MKS1-202ENST00000393119 NXPH1P58417 271 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 RPS15AP62244 130 aaKnown RBP14.15□□□□□ -0.14
MKS1-202ENST00000393119 TXNL4AP83876 142 aaKnown RBP14.15□□□□□ -0.14
MKS1-202ENST00000393119 TP53BP2Q13625 1128 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 TMEM35AQ53FP2 167 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 PPP4R4Q6NUP7 873 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 CROCCP3Q8IVE0 287 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 TMEM52Q8NDY8 209 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 BAHD1Q8TBE0 780 aaPredicted RBP14.15□□□□□ -0.14
MKS1-202ENST00000393119 TM4SF19Q96DZ7 209 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 MTERF3Q96E29 417 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 HSPBAP1Q96EW2 488 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 HSH2DQ96JZ2 352 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 AMDHD1Q96NU7 426 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 MAP3K3Q99759 626 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 SLC35C2Q9NQQ7 365 aa14.15□□□□□ -0.14
MKS1-202ENST00000393119 RSL24D1Q9UHA3 163 aaKnown RBP14.15□□□□□ -0.14
MKS1-202ENST00000393119 ZDBF2Q9HCK1 2354 aa14.14□□□□□ -0.15
MKS1-202ENST00000393119 PRAMEF27A3QJZ7 478 aa14.14□□□□□ -0.15
MKS1-202ENST00000393119 OR2W5A6NFC9 320 aa14.14□□□□□ -0.15
MKS1-202ENST00000393119 PRAMEF25A6NGN4 478 aa14.14□□□□□ -0.15
MKS1-202ENST00000393119 FKBP9O95302 570 aa14.14□□□□□ -0.15
MKS1-202ENST00000393119 SNAP29O95721 258 aa14.14□□□□□ -0.15
MKS1-202ENST00000393119 HNRNPCP07910 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
MKS1-202ENST00000393119 RETP07949 1114 aa14.14□□□□□ -0.15
MKS1-202ENST00000393119 FKBP9P1Q75LS8 142 aa14.14□□□□□ -0.15
MKS1-202ENST00000393119 GOLM1Q8NBJ4 401 aa14.14□□□□□ -0.15
MKS1-202ENST00000393119 TNIP2Q8NFZ5 429 aa14.14□□□□□ -0.15
MKS1-202ENST00000393119 OR52N2Q8NGI0 321 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms