RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CXorf57Q6NSI4 855 aaKnown RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 GPR142Q7Z601 462 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ACOT1Q86TX2 421 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SERPINA12Q8IW75 414 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 KLHL36Q8N4N3 616 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SAMD12Q8N8I0 201 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 OR4F6Q8NGB9 312 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 STAG3L4Q8TBR4 150 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 C12orf42Q96LP6 360 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 TMPRSS5Q9H3S3 457 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SDR39U1Q9NRG7 319 aaPredicted RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PSORS1C1Q9UIG5 152 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 CACNA1SQ13698 1873 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 DBX1A6NMT0 343 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ANXA2P2A6NMY6 339 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 WASH4PA8MWX3 477 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 RFXANKO14593 260 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 KIAA0355O15063 1070 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SLC28A2O43868 658 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 CREBL2O60519 120 aaPredicted RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 MATN4O95460 622 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 GUCA1CO95843 209 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 MT-CYBP00156 380 aaPredicted RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 IL1AP01583 271 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 CRYBA1P05813 215 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SLC35E2BP0CK96 405 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PRF1P14222 555 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF8P17098 575 aaPredicted RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SLC1A3P43003 542 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ASMTP46597 345 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PTSQ03393 145 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PTGR1Q14914 329 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PTCHD3Q3KNS1 767 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PDE12Q6L8Q7 609 aaKnown RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 NCEH1Q6PIU2 408 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 LARP4Q71RC2 724 aaKnown RBP eCLIP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 CXXC5Q7LFL8 322 aaKnown RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 KIAA0319LQ8IZA0 1049 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 OR2T4Q8NH00 348 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 EEF1AKMT1Q8WVE0 214 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SKA2Q8WVK7 121 aaPredicted RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 C14orf79Q96F83 325 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 RBP7Q96R05 134 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 NELL2Q99435 816 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ACBD6Q9BR61 282 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 NFKBIZQ9BYH8 718 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ATXN3LQ9H3M9 355 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 METTL8Q9H825 291 aaKnown RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 UNKLQ9H9P5 680 aaKnown RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 TPT1P8Q9HAU6 139 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 EIF2B3Q9NR50 452 aaKnown RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ZMYM5Q9UJ78 669 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 POMT2Q9UKY4 750 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ANKRD36CQ5JPF3 1778 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 F5H0A9 414 aaPredicted RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 RTCAO00442 366 aaKnown RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SOCS7O14512 581 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PPEF2O14830 753 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 DCLK1O15075 740 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 LILRB5O75023 590 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 POMCP01189 267 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SERPIND1P05546 499 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ANXA11P50995 505 aaKnown RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 CLCNKAP51800 687 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 FAM74A1Q5RGS3 127 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 AADACL4Q5VUY2 407 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ZPBP2Q6X784 338 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PDZD3Q86UT5 571 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 DNAJC22Q8N4W6 341 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ARL11Q969Q4 196 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 CPNE4Q96A23 557 aaPredicted RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 BSCL2Q96G97 398 aaPredicted RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 KLHL15Q96M94 604 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 CSPG4P5Q96PW8 444 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 OR5M11Q96RB7 305 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 KCNA7Q96RP8 456 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 DUSP16Q9BY84 665 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SMCO4Q9NRQ5 59 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 DUSP22Q9NRW4 184 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SMPD4Q9NXE4 827 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PTCH2Q9Y6C5 1203 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 A0A087X0M5 115 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 A0A1B0GX30 115 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 RGS14O43566 566 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 AOC2O75106 756 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 NDUFS3O75489 264 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 INHAP05111 366 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 SRPRAP08240 638 aaKnown RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 APEHP13798 732 aaKnown RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 GOT1P17174 413 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PAX6P26367 422 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 LAP3P28838 519 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 THPOP40225 353 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 RAP2BP61225 183 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF252P-AS1Q0IIN9 211 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 RSU1Q15404 277 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 TRAM1Q15629 374 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 SMAD2Q15796 467 aaKnown RBP7.3□□□□□ -1.24
VTI1A-201ENST00000393077 HFEQ30201 348 aa7.3□□□□□ -1.24
VTI1A-201ENST00000393077 PRSS36Q5K4E3 855 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms