RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 MCOLN3Q8TDD5 553 aa18.11■□□□□ 0.49
CCDC50-202ENST00000392456 HBEGFQ99075 208 aa18.11■□□□□ 0.49
CCDC50-202ENST00000392456 ZNF416Q9BWM5 594 aa18.11■□□□□ 0.49
CCDC50-202ENST00000392456 NUAK2Q9H093 628 aa18.11■□□□□ 0.49
CCDC50-202ENST00000392456 LMAN1LQ9HAT1 526 aa18.11■□□□□ 0.49
CCDC50-202ENST00000392456 TBC1D24Q9ULP9 559 aa18.11■□□□□ 0.49
CCDC50-202ENST00000392456 TNPO3Q9Y5L0 923 aaKnown RBP18.11■□□□□ 0.49
CCDC50-202ENST00000392456 LAMA1P25391 3075 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 H3BM21 787 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 PSIP1O75475 530 aaKnown RBP18.1■□□□□ 0.49
CCDC50-202ENST00000392456 MLYCDO95822 493 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 RELQ04864 619 aaPredicted RBP18.1■□□□□ 0.49
CCDC50-202ENST00000392456 GTF2H3Q13889 308 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 KIAA1161Q6NSJ0 714 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 GPRIN3Q6ZVF9 776 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 THAP5Q7Z6K1 395 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 P3H2Q8IVL5 708 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 GPALPP1Q8IXQ4 340 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 OR4F6Q8NGB9 312 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 C19orf60Q96EN9 201 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 NRTNQ99748 197 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 FOXQ1Q9C009 403 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 FZD4Q9ULV1 537 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 GPR34Q9UPC5 381 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 APOC1P02654 83 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 PIK3CGP48736 1102 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 TRAF3Q13114 568 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 PTCHD3Q3KNS1 767 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 TPRG1LQ5T0D9 272 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 USP30Q70CQ3 517 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 TSPYL5Q86VY4 417 aaPredicted RBP18.1■□□□□ 0.49
CCDC50-202ENST00000392456 PLD3Q8IV08 490 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 OR2L2Q8NH16 312 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 LINC00615Q96LM1 132 aaPredicted RBP18.1■□□□□ 0.49
CCDC50-202ENST00000392456 NCKAP1Q9Y2A7 1128 aa18.1■□□□□ 0.49
CCDC50-202ENST00000392456 CCDC154A6NI56 674 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 TPST1O60507 370 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 STK16O75716 305 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 HIST1H2AGP0C0S8 130 aaPredicted RBP18.09■□□□□ 0.49
CCDC50-202ENST00000392456 HIST1H2ADP20671 130 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 HTR6P50406 440 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 GBX2P52951 348 aaPredicted RBP18.09■□□□□ 0.49
CCDC50-202ENST00000392456 IQCCQ4KMZ1 466 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 PGBD3Q8N328 593 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 RIT1Q92963 219 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 HIST1H2AHQ96KK5 128 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 ZNF382Q96SR6 550 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 HIST1H2AJQ99878 128 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 H2AFJQ9BTM1 129 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 AKTIPQ9H8T0 292 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 PCDHB16Q9NRJ7 776 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 ANAPC2Q9UJX6 822 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 PLEKHM1Q9Y4G2 1056 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 DHRS12A0PJE2 317 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 FLI1Q01543 452 aaPredicted RBP18.09■□□□□ 0.49
CCDC50-202ENST00000392456 IMPG1Q17R60 797 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 GK5Q6ZS86 529 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 LARP4Q71RC2 724 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCDC50-202ENST00000392456 COMMD7Q86VX2 200 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 ADGRG3Q86Y34 549 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 DNAJA4Q8WW22 397 aaPredicted RBP18.09■□□□□ 0.49
CCDC50-202ENST00000392456 PHF21AQ96BD5 680 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 ZNF514Q96K75 400 aaPredicted RBP18.09■□□□□ 0.49
CCDC50-202ENST00000392456 SLC22A14Q9Y267 594 aa18.09■□□□□ 0.49
CCDC50-202ENST00000392456 RPH3AQ9Y2J0 694 aaPredicted RBP18.09■□□□□ 0.49
CCDC50-202ENST00000392456 MGAT4DA6NG13 374 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 ANGPT2O15123 496 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 WDPCPO95876 746 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 ITPKAP23677 461 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 PCDH1Q08174 1060 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 GRB7Q14451 532 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 C6orf141Q5SZD1 244 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 C16orf62Q7Z3J2 963 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 ZNF565Q8N9K5 539 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 UBTD2Q8WUN7 234 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 LGALS12Q96DT0 336 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 NODALQ96S42 347 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 SPAG4Q9NPE6 437 aa18.08■□□□□ 0.49
CCDC50-202ENST00000392456 SH3D21A4FU49 640 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 MAN2B1O00754 1011 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 SLC16A5O15375 505 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 PRAMEF4O60810 478 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 CRCPO75575 148 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 C1QBP02746 253 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 CEACAM5P06731 702 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 RPL35P42766 123 aaKnown RBP18.08■□□□□ 0.48
CCDC50-202ENST00000392456 MAP2K6P52564 334 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 PRAMEF9Q5VWM5 478 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 TIGD3Q6B0B8 471 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 LRRTM4Q86VH4 590 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 AMZ2Q86W34 360 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 TRIM54Q9BYV2 358 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 ING3Q9NXR8 418 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 COA4Q9NYJ1 87 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 MBD2Q9UBB5 411 aa18.08■□□□□ 0.48
CCDC50-202ENST00000392456 CFAP20Q9Y6A4 193 aaKnown RBP18.08■□□□□ 0.48
CCDC50-202ENST00000392456 C1orf105O95561 183 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 SLC16A8O95907 504 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 TGFBR1P36897 503 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 SLC6A12P48065 614 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms