RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ARHGAP39Q9C0H5 1083 aa14.37□□□□□ -0.11
VLDLR-202ENST00000382099 CHMP1AQ9HD42 196 aaPredicted RBP14.37□□□□□ -0.11
VLDLR-202ENST00000382099 SHROOM3Q8TF72 1996 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 IFRD1O00458 451 aaPredicted RBP14.36□□□□□ -0.11
VLDLR-202ENST00000382099 MID1O15344 667 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 HBQ1P09105 142 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 ITGB8P26012 769 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 KDELR2P33947 212 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 ARL2P36404 184 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 CCR6P51684 374 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 ABRAXAS2Q15018 415 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 CYB5R2Q6BCY4 276 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 UNC5DQ6UXZ4 953 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 LAPTM4BQ86VI4 370 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 RELL2Q8NC24 303 aaPredicted RBP14.36□□□□□ -0.11
VLDLR-202ENST00000382099 KCNJ9Q92806 393 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 OR2M2Q96R28 347 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 MNTQ99583 582 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 THAP7Q9BT49 309 aaPredicted RBP14.36□□□□□ -0.11
VLDLR-202ENST00000382099 NANSQ9NR45 359 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 HEBP1Q9NRV9 189 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 RBM22Q9NW64 420 aaKnown RBP eCLIP14.36□□□□□ -0.11
VLDLR-202ENST00000382099 NLGN3Q9NZ94 848 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 MYEF2Q9P2K5 600 aaKnown RBP14.36□□□□□ -0.11
VLDLR-202ENST00000382099 DTX4Q9Y2E6 619 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 SIP14410 1827 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 A0A1B0GV90 55 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 WRBO00258 174 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 S1PR4O95977 384 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 OPN1SWP03999 348 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 FPR3P25089 353 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 S100PP25815 95 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 CNR2P34972 360 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 OR1E2P47887 323 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 GEMP55040 296 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 ST3GAL2Q16842 350 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 FAM187BQ17R55 369 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 MLIPQ5VWP3 458 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 NOTUMQ6P988 496 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 MPZL3Q6UWV2 235 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 TRPV1Q8NER1 839 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 FUBP1Q96AE4 644 aaKnown RBP14.36□□□□□ -0.11
VLDLR-202ENST00000382099 SCMH1Q96GD3 660 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 SPSB2Q99619 263 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 SEMA4CQ9C0C4 833 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 ARL6Q9H0F7 186 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 TMEM134Q9H6X4 195 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 PMS2P1A4D2B8 440 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 BDKRB1P46663 353 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 HSPA7P48741 367 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 EVX1P49640 407 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 RABGGTBP53611 331 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 RPS25P62851 125 aaKnown RBP14.36□□□□□ -0.11
VLDLR-202ENST00000382099 ABHD18Q0P651 414 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 SLC14A1Q13336 389 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 TAF1AQ15573 450 aaPredicted RBP14.36□□□□□ -0.11
VLDLR-202ENST00000382099 SLC39A12Q504Y0 691 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 ATAT1Q5SQI0 421 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 LRRN1Q6UXK5 716 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 ZDHHC17Q8IUH5 632 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 CA5BP1Q8WTZ4 195 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 SMAD5Q99717 465 aaKnown RBP14.36□□□□□ -0.11
VLDLR-202ENST00000382099 CACNG6Q9BXT2 260 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 BTBD1Q9H0C5 482 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 GLOD4Q9HC38 313 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 ABCC13Q9NSE7 274 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 HACL1Q9UJ83 578 aa14.36□□□□□ -0.11
VLDLR-202ENST00000382099 COL4A5P29400 1685 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 LOC285095A0A1B0GVY8 99 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 METTL21EPA6NDL7 271 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 GPR31O00270 319 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 RFXANKO14593 260 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 ARPC5O15511 151 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 TLR5O60602 858 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 TPST2O60704 377 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 RP2O75695 350 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 TCRBP04435 133 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 IFNA4P05014 189 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 KLK3P07288 261 aaPredicted RBP14.35□□□□□ -0.11
VLDLR-202ENST00000382099 XKP51811 444 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 PTGES3Q15185 160 aaKnown RBP14.35□□□□□ -0.11
VLDLR-202ENST00000382099 FAM180BQ6P0A1 224 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 ANGPTL8Q6UXH0 198 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 ABHD15Q6UXT9 468 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 ZNF621Q6ZSS3 439 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 SHFQ7M4L6 423 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 ATPAF2Q8N5M1 289 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 TSSK3Q96PN8 268 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 GMLQ99445 158 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 MCOLN1Q9GZU1 580 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 PCTPQ9UKL6 214 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 MIA3Q5JRA6 1907 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 KERAO60938 352 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 SPDEFO95238 335 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 TFP02787 698 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 CDKN2CP42773 168 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 SOX4Q06945 474 aaPredicted RBP14.35□□□□□ -0.11
VLDLR-202ENST00000382099 SEC23BQ15437 767 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 IL20RBQ6UXL0 311 aa14.35□□□□□ -0.11
VLDLR-202ENST00000382099 TMEM91Q6ZNR0 172 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms