RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 PRR35P0CG20 571 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 HK2P52789 917 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 ZNF763Q0D2J5 394 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 TERF2Q15554 542 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 SMU1Q2TAY7 513 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 GALNTL6Q49A17 601 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 ATP6AP1LQ52LC2 224 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 C6orf136Q5SQH8 315 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 PLAG1Q6DJT9 500 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 SLC48A1Q6P1K1 146 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 PCSK4Q6UW60 755 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 RIPOR1Q6ZS17 1223 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 RGS9BPQ6ZS82 235 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 MMP21Q8N119 569 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 GALNT16Q8N428 558 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 ARFGAP2Q8N6H7 521 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 NFAM1Q8NET5 270 aaPredicted RBP17.54■□□□□ 0.4
SSU72-203ENST00000378725 M1APQ8TC57 530 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 ADNPQ9H2P0 1102 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 MEAF6Q9HAF1 191 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 ADAP2Q9NPF8 381 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 HEY2Q9UBP5 337 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 TUBD1Q9UJT1 453 aa17.54■□□□□ 0.4
SSU72-203ENST00000378725 PPIEQ9UNP9 301 aaKnown RBP17.54■□□□□ 0.4
SSU72-203ENST00000378725 SAGE2PA6NJ88 616 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 HDAC3O15379 428 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 SERPINA7P05543 415 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 IL3P08700 152 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 RPL38P63173 70 aaKnown RBP17.53■□□□□ 0.4
SSU72-203ENST00000378725 ID2Q02363 134 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 HEPACAMQ14CZ8 416 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 ELAVL1Q15717 326 aaKnown RBP17.53■□□□□ 0.4
SSU72-203ENST00000378725 EXT1Q16394 746 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 FAM71E1Q6IPT2 247 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 WDR75Q8IWA0 830 aaKnown RBP17.53■□□□□ 0.4
SSU72-203ENST00000378725 PARP9Q8IXQ6 854 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 KBTBD2Q8IY47 623 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 LRRC34Q8IZ02 419 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 EXD3Q8N9H8 876 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 OR4K14Q8NGD5 310 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 PIWIL2Q8TC59 973 aaKnown RBP17.53■□□□□ 0.4
SSU72-203ENST00000378725 TUBGCP3Q96CW5 907 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 ARHGAP9Q9BRR9 750 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 NUF2Q9BZD4 464 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 AKTIPQ9H8T0 292 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 MYNNQ9NPC7 610 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 PNO1Q9NRX1 252 aaKnown RBP17.53■□□□□ 0.4
SSU72-203ENST00000378725 GIMAP2Q9UG22 337 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 PSME2Q9UL46 239 aa17.53■□□□□ 0.4
SSU72-203ENST00000378725 EPG5Q9HCE0 2579 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 MYOCOSA0A1B0GUC4 107 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 A8MUA0 341 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 VPS4BO75351 444 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 SLC35E2P0CK97 266 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 ALOX15P16050 662 aaPredicted RBP17.52■□□□□ 0.4
SSU72-203ENST00000378725 SDC1P18827 310 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 TACR1P25103 407 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 GALNSP34059 522 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 STT3AP46977 705 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 GPR143P51810 404 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 SLC26A5P58743 744 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 AP2B1P63010 937 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 EMX2Q04743 252 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 C2orf80Q0P641 193 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 IKBIPQ70UQ0 350 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 CRLF3Q8IUI8 442 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 TMEM132CQ8N3T6 1108 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 AMER2Q8N7J2 671 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 FDCSPQ8NFU4 85 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 PTPMT1Q8WUK0 201 aaPredicted RBP17.52■□□□□ 0.4
SSU72-203ENST00000378725 RBM18Q96H35 190 aaKnown RBP17.52■□□□□ 0.4
SSU72-203ENST00000378725 UBL7Q96S82 380 aaPredicted RBP17.52■□□□□ 0.4
SSU72-203ENST00000378725 LHPPQ9H008 270 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 MMP25Q9NPA2 562 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 SLCO1B3Q9NPD5 702 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 EHD3Q9NZN3 535 aa17.52■□□□□ 0.4
SSU72-203ENST00000378725 EXO1Q9UQ84 846 aaKnown RBP17.52■□□□□ 0.4
SSU72-203ENST00000378725 PCDHGA9Q9Y5G4 932 aaKnown RBP17.52■□□□□ 0.4
SSU72-203ENST00000378725 KMT2BQ9UMN6 2715 aaPredicted RBP17.52■□□□□ 0.39
SSU72-203ENST00000378725 A6NL46 340 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 TRPC5OSA6NMA1 111 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 ZNF195O14628 629 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 IFNA16P05015 189 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 FAM87AP0C7U9 286 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 KITP10721 976 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 BCKDHAP12694 445 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 DDCP20711 480 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 ITGA3P26006 1051 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 PIK3R1P27986 724 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 MAPK1P28482 360 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 XKP51811 444 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 KCNAB2Q13303 367 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 MYBPC3Q14896 1274 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 BTBD16Q32M84 506 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 JMJD6Q6NYC1 403 aaPredicted RBP17.51■□□□□ 0.39
SSU72-203ENST00000378725 LARP4Q71RC2 724 aaKnown RBP eCLIP17.51■□□□□ 0.39
SSU72-203ENST00000378725 ST13P4Q8IZP2 240 aaPredicted RBP17.51■□□□□ 0.39
SSU72-203ENST00000378725 LSM14AQ8ND56 463 aaKnown RBP17.51■□□□□ 0.39
SSU72-203ENST00000378725 ELP5Q8TE02 316 aa17.51■□□□□ 0.39
SSU72-203ENST00000378725 PSMF1Q92530 271 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms