RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 FAHD1Q6P587 224 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 NETO1Q8TDF5 533 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 PSMG2Q969U7 264 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 DZANK1Q9NVP4 752 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 MPSTP25325 297 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 TSSK3Q96PN8 268 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 YIPF4Q9BSR8 244 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 NMNAT1Q9HAN9 279 aaPredicted RBP4.73□□□□□ -1.65
PCDH9-201ENST00000377861 RNF150Q9ULK6 438 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 LRP6O75581 1613 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 G6PDP11413 515 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 HSD17B7P56937 341 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 LIX1Q8N485 282 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 SNX8Q9Y5X2 465 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 SNTA1Q13424 505 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 NAE1Q13564 534 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 TIGD5Q53EQ6 642 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 BTN2A2Q8WVV5 523 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 TRNAU1APQ9NX07 287 aaKnown RBP4.73□□□□□ -1.65
PCDH9-201ENST00000377861 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 WNT4P56705 351 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 KCNAB2Q13303 367 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 XKR7Q5GH72 579 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 CDHR3Q6ZTQ4 885 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 GIMAP5Q96F15 307 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 HERPUD2Q9BSE4 406 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 PIGMQ9H3S5 423 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 RIMS4Q9H426 269 aaPredicted RBP4.73□□□□□ -1.65
PCDH9-201ENST00000377861 TCEAL5Q5H9L2 206 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 FBXO30Q8TB52 745 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 NEURL3Q96EH8 262 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 RBP7Q96R05 134 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 EDARQ9UNE0 448 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 UBBP0CG47 229 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 UBCP0CG48 685 aaKnown RBP4.73□□□□□ -1.65
PCDH9-201ENST00000377861 UGT2B7P16662 529 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 TFGQ92734 400 aaPredicted RBP4.73□□□□□ -1.65
PCDH9-201ENST00000377861 SLAMF9Q96A28 289 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 SHDQ96IW2 340 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 MRGPRX2Q96LB1 330 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 RHBGQ9H310 441 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 ELP3Q9H9T3 547 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 SLC25A12O75746 678 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 CTXN2P0C2S0 81 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 EVX2Q03828 476 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 SLC43A3Q8NBI5 491 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 B3GNT7Q8NFL0 401 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 ACAT2Q9BWD1 397 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 HAO2Q9NYQ3 351 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 KNDC1Q76NI1 1749 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 BAK1Q16611 211 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 PSAPL1Q6NUJ1 521 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 IGDCC3Q8IVU1 814 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 ACOT11Q8WXI4 607 aaPredicted RBP4.73□□□□□ -1.65
PCDH9-201ENST00000377861 TIGARQ9NQ88 270 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 ABCG2Q9UNQ0 655 aa4.73□□□□□ -1.65
PCDH9-201ENST00000377861 EFCAB7A8K855 629 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 EMP3P54852 163 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 OR5D14Q8NGL3 314 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 GPR148Q8TDV2 347 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 FEVQ99581 238 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 RNF24Q9Y225 148 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 MYBPHLA2RUH7 354 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 LOC730098B7Z3J9 87 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PSMB1P20618 241 aaKnown RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CHRNA4P43681 627 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ART1P52961 327 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 DUSP22Q9NRW4 184 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SPATA2Q9UM82 520 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 VIPR1P32241 457 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TYW3Q6IPR3 259 aaKnown RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 NLKQ9UBE8 527 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CSNK1G3Q9Y6M4 447 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CMC1Q7Z7K0 106 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ABCB10Q9NRK6 738 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CYB5AP00167 134 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 IGLV3-25P01717 112 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 THBS1P07996 1170 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ICAM2P13598 275 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 RBMS1P29558 406 aaKnown RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 NEIL3Q8TAT5 605 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 LRCH3Q96II8 777 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 MCMBPQ9BTE3 642 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TSPAN4O14817 238 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PRDX1Q06830 199 aaKnown RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ING5Q8WYH8 240 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF583Q96ND8 569 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PIH1D1Q9NWS0 290 aaKnown RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 NXPE2Q96DL1 559 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SGK494L7N484 410 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CALCBP10092 127 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ACRV1P26436 265 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 YPEL5P62699 121 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SVBPQ8N300 66 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF431Q8TF32 576 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TBC1D3EA0A087X179 549 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TMX2-CTNND1H3BSU7 103 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 NTRK2Q16620 822 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TAC4Q86UU9 113 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 HMCESQ96FZ2 354 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms