RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ANXA2P2A6NMY6 339 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 PSMD9O00233 223 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 GBAP04062 536 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ANXA2P07355 339 aaKnown RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF84P51523 738 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 NUDT6P53370 316 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 GBX1Q14549 363 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 PCBP2Q15366 365 aaKnown RBP eCLIP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 TMEM240Q5SV17 173 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 SUSD1Q6UWL2 747 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 SCD5Q86SK9 330 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 MFSD6LQ8IWD5 586 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 TOMM5Q8N4H5 51 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 DNAJA4Q8WW22 397 aaPredicted RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ULBP3Q9BZM4 244 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 NGBQ9NPG2 151 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 PCDHB10Q9UN67 800 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 CEP290O15078 2479 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 C5orf51A6NDU8 294 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 HIDE1A8MVS5 230 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 CLIC3O95833 236 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ALDOAP04075 364 aaKnown RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 AOC1P19801 751 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 NUMA1Q14980 2115 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 MRPL10Q7Z7H8 261 aaKnown RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 SYVN1Q86TM6 617 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 PPP1R3BQ86XI6 285 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 FAM174AQ8TBP5 190 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ARRDC3Q96B67 414 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 TRIM43Q96BQ3 446 aaPredicted RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF347Q96SE7 839 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 MARCH4Q9P2E8 410 aaPredicted RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 SLC22A14Q9Y267 594 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 SCN7AQ01118 1682 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 IVDP26440 423 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 EEFSECP57772 596 aaKnown RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF33AQ06730 810 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 RPA4Q13156 261 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 FAM78AQ5JUQ0 283 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 PRPF38BQ5VTL8 546 aaKnown RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 KIAA0319Q5VV43 1072 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 TRNP1Q6NT89 227 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 TMPRSS9Q7Z410 1059 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 NPLQ9BXD5 320 aaPredicted RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 RETREG1Q9H6L5 497 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF282Q9UDV7 671 aaPredicted RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 TEX46H3BTG2 121 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 WRBO00258 174 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 INMTO95050 263 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 C8orf89P0DMQ9 161 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF28P17035 718 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 STT3AP46977 705 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 CLRN1P58418 232 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 RPS14P62263 151 aaKnown RBP10.37□□□□□ -0.75
HIF3A-205ENST00000377670 NFKB2Q00653 900 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 OCLNQ16625 522 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF404Q494X3 552 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 SPIN4Q56A73 249 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 PRAMEF17Q5VTA0 474 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ADAMTS18Q8TE60 1221 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 SMIM14Q96QK8 99 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 SRPK3Q9UPE1 567 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ANKRD12Q6UB98 2062 aa10.37□□□□□ -0.75
HIF3A-205ENST00000377670 ENDOUP21128 410 aaKnown RBP10.36□□□□□ -0.75
HIF3A-205ENST00000377670 MSX1P28360 303 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 P2RY2P41231 377 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ARSDP51689 593 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ADAM8P78325 824 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 RHDQ02161 417 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 NIPAL4Q0D2K0 466 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 RBM12BQ8IXT5 1001 aaKnown RBP10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ZADH2Q8N4Q0 377 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 IL4I1Q96RQ9 567 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 DUSP26Q9BV47 211 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 AKTIPQ9H8T0 292 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 LRIT1Q9P2V4 623 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 NRAPQ86VF7 1730 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 SH3D21A4FU49 640 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 FBP2O00757 339 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 KIAA0355O15063 1070 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 GJB3O75712 270 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 STOMP27105 288 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 DNAJA1P31689 397 aaKnown RBP10.36□□□□□ -0.75
HIF3A-205ENST00000377670 EMP2P54851 167 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 TSPAN5P62079 268 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 TCEAL1Q15170 157 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 RAB12Q6IQ22 244 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF773Q6PK81 442 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 AGTRAPQ6RW13 159 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 CEACAM20Q6UY09 585 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ARMC5Q96C12 935 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ARL5BQ96KC2 179 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 EDEM2Q9BV94 578 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 CTPS2Q9NRF8 586 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 TAS2R9Q9NYW1 312 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 COQ3Q9NZJ6 369 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 VPS29Q9UBQ0 182 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 MGAT4AQ9UM21 535 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 DAPL1A0PJW8 107 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms