RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 PHF10Q8WUB8 498 aaKnown RBP19.18■□□□□ 0.66
VSX1-202ENST00000376709 RORBQ92753 470 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 RHNO1Q9BSD3 238 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 CCNB1IP1Q9NPC3 277 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 SPHK1Q9NYA1 384 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 NCKAP1Q9Y2A7 1128 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 ENPP4Q9Y6X5 453 aa19.18■□□□□ 0.66
VSX1-202ENST00000376709 NDUFS2O75306 463 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 GADD45GO95257 159 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 RHCEP18577 417 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 GP2P55259 537 aaKnown RBP19.17■□□□□ 0.66
VSX1-202ENST00000376709 KCNC4Q03721 635 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 LRRC32Q14392 662 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 CCDC81Q6ZN84 652 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 P3H2Q8IVL5 708 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 FAR1Q8WVX9 515 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 JPH3Q8WXH2 748 aaPredicted RBP19.17■□□□□ 0.66
VSX1-202ENST00000376709 ZNF576Q9H609 170 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 GPN2Q9H9Y4 310 aaPredicted RBP19.17■□□□□ 0.66
VSX1-202ENST00000376709 ACER3Q9NUN7 267 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 TAS2R7Q9NYW3 318 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 PSME2Q9UL46 239 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 SCML1Q9UN30 329 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 PCDHGA10Q9Y5H3 936 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 NINQ8N4C6 2090 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 TMEM247A6NEH6 219 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 GLOD5A6NK44 160 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 HMGN4O00479 90 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 RGS10O43665 173 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 MAN1A2O60476 641 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 B4GALT2O60909 372 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 TFPTP0C1Z6 253 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 HTR1BP28222 390 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 BNIP3Q12983 259 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 SLAMF1Q13291 335 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 RD3Q7Z3Z2 195 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 ZBTB46Q86UZ6 589 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 OR9Q2Q8NGE9 314 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 OR8K5Q8NH50 307 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 FAM81AQ8TBF8 368 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 MS4A6EQ96DS6 147 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 SCARF2Q96GP6 870 aaPredicted RBP19.17■□□□□ 0.66
VSX1-202ENST00000376709 CSF3RQ99062 836 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 NIPSNAP1Q9BPW8 284 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 EHD3Q9NZN3 535 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 RHCGQ9UBD6 479 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 PIAS3Q9Y6X2 628 aa19.17■□□□□ 0.66
VSX1-202ENST00000376709 PRICKLE3O43900 615 aaPredicted RBP19.16■□□□□ 0.66
VSX1-202ENST00000376709 WBP4O75554 376 aaKnown RBP19.16■□□□□ 0.66
VSX1-202ENST00000376709 PRKRAO75569 313 aaKnown RBP19.16■□□□□ 0.66
VSX1-202ENST00000376709 PDE9AO76083 593 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 VIPP01282 170 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 ACADMP11310 421 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 CMPK1P30085 196 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 PEBP1P30086 187 aaKnown RBP19.16■□□□□ 0.66
VSX1-202ENST00000376709 MLC1Q15049 377 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 ZIC1Q15915 447 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 ENPP7Q6UWV6 458 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 TAGAPQ8N103 731 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 SMRP1Q8NCR6 262 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 PROX1Q92786 737 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 GLIPR2Q9H4G4 154 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 SLC35C2Q9NQQ7 365 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 ETAA1Q9NY74 926 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 TBC1D29Q9UFV1 150 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 RNF6Q9Y252 685 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 PCDHGA2Q9Y5H1 932 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 MDC1Q14676 2089 aaKnown RBP19.16■□□□□ 0.66
VSX1-202ENST00000376709 ISM1B1AKI9 464 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 PCDH17O14917 1159 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 AXIN1O15169 862 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 BCL10O95999 233 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 POU2F1P14859 743 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 HIST1H1TP22492 207 aaPredicted RBP19.16■□□□□ 0.66
VSX1-202ENST00000376709 NTSP30990 170 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 AHRP35869 848 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 GGT2P36268 569 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 MAP2K4P45985 399 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 NCBP2P52298 156 aaKnown RBP eCLIP19.16■□□□□ 0.66
VSX1-202ENST00000376709 TDHQ8IZJ6 230 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 PSMA8Q8TAA3 256 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 APH1BQ8WW43 257 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 LCN9Q8WX39 176 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 TANKQ92844 425 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 AMDHD1Q96NU7 426 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 BBS4Q96RK4 519 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 KIR3DX1Q9H7L2 352 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 KLHL20Q9Y2M5 609 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 HCN4Q9Y3Q4 1203 aa19.16■□□□□ 0.66
VSX1-202ENST00000376709 WASHC1A8K0Z3 465 aa19.15■□□□□ 0.66
VSX1-202ENST00000376709 E9PQ18 207 aa19.15■□□□□ 0.66
VSX1-202ENST00000376709 H0Y8X5 98 aa19.15■□□□□ 0.66
VSX1-202ENST00000376709 ERAL1O75616 437 aaKnown RBP19.15■□□□□ 0.66
VSX1-202ENST00000376709 CCNB2O95067 398 aa19.15■□□□□ 0.66
VSX1-202ENST00000376709 FADS2O95864 444 aaKnown RBP19.15■□□□□ 0.66
VSX1-202ENST00000376709 MT-ND2P03891 347 aa19.15■□□□□ 0.66
VSX1-202ENST00000376709 NR4A1P22736 598 aa19.15■□□□□ 0.66
VSX1-202ENST00000376709 IDH2P48735 452 aaKnown RBP19.15■□□□□ 0.66
VSX1-202ENST00000376709 HYAL2Q12891 473 aa19.15■□□□□ 0.66
VSX1-202ENST00000376709 PUM1Q14671 1186 aaKnown RBP eCLIP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms