RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 RILPQ96NA2 401 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 ZNF285Q96NJ3 590 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 TAAR6Q96RI8 345 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 C12orf57Q99622 126 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 CHP1Q99653 195 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 KIFC1Q9BW19 673 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 ZNF416Q9BWM5 594 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 GSDMCQ9BYG8 508 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 NAT10Q9H0A0 1025 aaKnown RBP3.72□□□□□ -1.81
LRRC39-203ENST00000370138 RAB17Q9H0T7 212 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 FOXP1Q9H334 677 aaPredicted RBP3.72□□□□□ -1.81
LRRC39-203ENST00000370138 FAM83DQ9H4H8 585 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 FBXO44Q9H4M3 255 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 CNOT10Q9H9A5 744 aaKnown RBP3.72□□□□□ -1.81
LRRC39-203ENST00000370138 VIPAS39Q9H9C1 493 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 RNPEPL1Q9HAU8 725 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 NMUR1Q9HB89 426 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 RAVER2Q9HCJ3 691 aaKnown RBP3.72□□□□□ -1.81
LRRC39-203ENST00000370138 S100A14Q9HCY8 104 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 TIGARQ9NQ88 270 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.72□□□□□ -1.81
LRRC39-203ENST00000370138 XPNPEP1Q9NQW7 623 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 ABCB10Q9NRK6 738 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 ZCCHC3Q9NUD5 404 aaKnown RBP3.72□□□□□ -1.81
LRRC39-203ENST00000370138 CLEC5AQ9NY25 188 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 PLEK2Q9NYT0 353 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 BCAP29Q9UHQ4 241 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 FBXW2Q9UKT8 454 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 PLEKHA6Q9Y2H5 1048 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 CPQQ9Y646 472 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 USH1CQ9Y6N9 552 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 MYO3AQ8NEV4 1616 aa3.72□□□□□ -1.81
LRRC39-203ENST00000370138 ABCC1P33527 1531 aa3.71□□□□□ -1.81
LRRC39-203ENST00000370138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.71□□□□□ -1.81
LRRC39-203ENST00000370138 ZNF518AQ6AHZ1 1483 aa3.71□□□□□ -1.81
LRRC39-203ENST00000370138 IFT172Q9UG01 1749 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 QRICH2Q9H0J4 1663 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 CLUHO75153 1309 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 CNTNAP2Q9UHC6 1331 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 CFAP74Q9C0B2 1584 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 INO80Q9ULG1 1556 aaPredicted RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 MEX3AA1L020 520 aaKnown RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 CFAP73A6NFT4 308 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 OOEPA6NGQ2 149 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 SMIM23A6NLE4 172 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 OR52A4PA6NMU1 304 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 BECN2A8MW95 431 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 EFCAB8A8MWE9 144 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 MYO1GB0I1T2 1018 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 KDM4EB2RXH2 506 aaPredicted RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 ANKRD65E5RJM6 399 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 hCG_2039718K7EN88 272 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 ADAMDEC1O15204 470 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 NUPL2O15504 423 aaKnown RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 GRID2O43424 1007 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 EIF1BO60739 113 aaKnown RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 HCN1O60741 890 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 SCN2BO60939 215 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 AKAP3O75969 853 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 DFFBO76075 338 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 CNTN5O94779 1100 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 OR6B1O95007 311 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 ZBTB11O95625 1053 aaPredicted RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 DDAH2O95865 285 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 FCER2P06734 321 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 MMP3P08254 477 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 GSTA1P08263 222 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 TMEM191BP0C7N4 346 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 OR2T7P0C7T2 308 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 LINC00614P0C842 121 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 DBTP11182 482 aaKnown RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 NQO2P16083 231 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 CD36P16671 472 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 XRCC1P18887 633 aaPredicted RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 RAB3AP20336 220 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 DTYMKP23919 212 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 EPHA8P29322 1005 aaPredicted RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 MC5RP33032 325 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 THBS4P35443 961 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 CYLC1P35663 651 aaPredicted RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 EIF1P41567 113 aaKnown RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 PRKCIP41743 596 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 MAGEB1P43366 347 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 YAP1P46937 504 aaKnown RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 PRKAA2P54646 552 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 PKNOX1P55347 436 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 NUP107P57740 925 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 TIRAPP58753 221 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 CXCR4P61073 352 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 SUMO2P61956 95 aaKnown RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 CACNG1Q06432 222 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 PEX6Q13608 980 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 RCAN2Q14206 197 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 MVPQ14764 893 aaKnown RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 TOMM34Q15785 309 aaPredicted RBP3.71□□□□□ -1.82
LRRC39-203ENST00000370138 GSTA3Q16772 222 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 CNPY1Q3B7I2 92 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 SLC36A3Q495N2 470 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 ACCSLQ4AC99 568 aa3.71□□□□□ -1.82
LRRC39-203ENST00000370138 RUNDC3AQ59EK9 446 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms