RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SEC14L4Q9UDX3 406 aa12.94□□□□□ -0.34
PRKN-205ENST00000366897 HYKKA2RU49 373 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 SH3D21A4FU49 640 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 HEPACAM2A8MVW5 462 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 NPIPB8E9PQR5 432 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 RNASET2O00584 256 aaKnown RBP12.93□□□□□ -0.34
PRKN-205ENST00000366897 CD79BP40259 229 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 ETV5P41161 510 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 ETV1P50549 477 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 CTSCP53634 463 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 ATN1P54259 1190 aaPredicted RBP12.93□□□□□ -0.34
PRKN-205ENST00000366897 RPS25P62851 125 aaKnown RBP12.93□□□□□ -0.34
PRKN-205ENST00000366897 EEF1A2Q05639 463 aaKnown RBP12.93□□□□□ -0.34
PRKN-205ENST00000366897 DBPQ10586 325 aaPredicted RBP12.93□□□□□ -0.34
PRKN-205ENST00000366897 COL9A2Q14055 689 aaPredicted RBP12.93□□□□□ -0.34
PRKN-205ENST00000366897 INSL4Q14641 139 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 PDZD3Q86UT5 571 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 CBARPQ8N350 705 aaPredicted RBP12.93□□□□□ -0.34
PRKN-205ENST00000366897 DBF4BQ8NFT6 615 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 CREB3L4Q8TEY5 395 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 CASD1Q96PB1 797 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 NELL2Q99435 816 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 UCK2Q9BZX2 261 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 REEP4Q9H6H4 257 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 NLKQ9UBE8 527 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 REV1Q9UBZ9 1251 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 SGTAO43765 313 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 PRKYO43930 277 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 TSC22D2O75157 780 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 SDHBP21912 280 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 PTGER1P34995 402 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 XKP51811 444 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 AP1S2P56377 157 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 TLE2Q04725 743 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 CDKL4Q5MAI5 379 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 GRHL2Q6ISB3 625 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 CASP12Q6UXS9 341 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 USP45Q70EL2 814 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 RNF180Q86T96 592 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 NRTNQ99748 197 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 ABCG4Q9H172 646 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 ACOXLQ9NUZ1 547 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 PCDHB7Q9Y5E2 793 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 XIRP2A4UGR9 3374 aa12.93□□□□□ -0.34
PRKN-205ENST00000366897 C12orf71A8MTZ7 269 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 SH3BP5O60239 455 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 ICMTO60725 284 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 IMPA1P29218 277 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 SPINT3P49223 89 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 RHAGQ02094 409 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 ZNF763Q0D2J5 394 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 TARDBPQ13148 414 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRKN-205ENST00000366897 QPRTQ15274 297 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 SLC35F1Q5T1Q4 408 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 KIAA1841Q6NSI8 718 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 TRIM40Q6P9F5 258 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 B3GLCTQ6Y288 498 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 DPY19L3Q6ZPD9 716 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 OR4D11Q8NGI4 311 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 OR5H6Q8NGV6 325 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 OR52P1PQ8NH57 321 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 GATAD2BQ8WXI9 593 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 SLC25A46Q96AG3 418 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 SPATA9Q9BWV2 254 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 SMG9Q9H0W8 520 aaKnown RBP12.92□□□□□ -0.34
PRKN-205ENST00000366897 POLR2J3Q9H1A7 115 aaKnown RBP12.92□□□□□ -0.34
PRKN-205ENST00000366897 SUV39H2Q9H5I1 410 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 MVB12BQ9H7P6 319 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 NDUFB11Q9NX14 153 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 GPR52Q9Y2T5 361 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 ALG5Q9Y673 324 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 DOCK6Q96HP0 2047 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 ZSCAN5BA6NJL1 495 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 GJA1P17302 382 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 RHCEP18577 417 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 ETV3P41162 512 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 P2RX3P56373 397 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 ASAH1Q13510 395 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 PIN1Q13526 163 aaPredicted RBP12.92□□□□□ -0.34
PRKN-205ENST00000366897 SLBPQ14493 270 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRKN-205ENST00000366897 BTBD16Q32M84 506 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 SYTL3Q4VX76 610 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 SZRD1Q7Z422 152 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 TMEM150AQ86TG1 271 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 NANOGP1Q8N7R0 232 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 GPR32P1Q8NGA4 272 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 AUTS2Q8WXX7 1259 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 DCLRE1CQ96SD1 692 aaKnown RBP12.92□□□□□ -0.34
PRKN-205ENST00000366897 MND1Q9BWT6 205 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 RC3H2Q9HBD1 1191 aaKnown RBP12.92□□□□□ -0.34
PRKN-205ENST00000366897 PCDH10Q9P2E7 1040 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 TMCC3Q9ULS5 477 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 UNC80Q8N2C7 3258 aa12.92□□□□□ -0.34
PRKN-205ENST00000366897 IGLV3-16A0A075B6K0 115 aa12.91□□□□□ -0.34
PRKN-205ENST00000366897 ANKDD1BA6NHY2 528 aa12.91□□□□□ -0.34
PRKN-205ENST00000366897 H0YIV9 168 aa12.91□□□□□ -0.34
PRKN-205ENST00000366897 H7C4K7 107 aa12.91□□□□□ -0.34
PRKN-205ENST00000366897 EIF3FO00303 357 aaPredicted RBP12.91□□□□□ -0.34
PRKN-205ENST00000366897 SOCS5O75159 536 aa12.91□□□□□ -0.34
PRKN-205ENST00000366897 NTN1O95631 604 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms