RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 UPRTQ96BW1 309 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 PPCDCQ96CD2 204 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 HYLS1Q96M11 299 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 ARHGAP39Q9C0H5 1083 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 RETREG1Q9H6L5 497 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 C1GALT1Q9NS00 363 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 SPATA6Q9NWH7 488 aaPredicted RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 PCDHB7Q9Y5E2 793 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 PTPRDP23468 1912 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 CENPFP49454 3210 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 NINQ8N4C6 2090 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 SNTNA6NMZ2 147 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 I3L521 148 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 SAP18O00422 153 aaKnown RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 SYN3O14994 580 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 HPGDSO60760 199 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 GLULP15104 373 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 ATF4P18848 351 aaPredicted RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 POU3F3P20264 500 aaPredicted RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 TIA1P31483 386 aaKnown RBP eCLIP7.32□□□□□ -1.243e-8■■■■■ 27.7
CD46-204ENST00000357714 LIMS1P48059 325 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 AP2S1P53680 142 aaPredicted RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 RPS13P62277 151 aaKnown RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 MC1RQ01726 317 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 MGAT3Q09327 533 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 TAF12Q16514 161 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 UAP1L1Q3KQV9 507 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 LDLRAD1Q5T700 205 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 LAMTOR1Q6IAA8 161 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 SERPINA13PQ6UXR4 307 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 RFLNAQ6ZTI6 216 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 USP45Q70EL2 814 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 ZFP41Q8N8Y5 198 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 GATAD2BQ8WXI9 593 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 AKAP1Q92667 903 aaKnown RBP eCLIP7.32□□□□□ -1.24
CD46-204ENST00000357714 MS4A4AQ96JQ5 239 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 ZSCAN5AQ9BUG6 496 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 GPR62Q9BZJ7 368 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 MCOLN1Q9GZU1 580 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 HDHD2Q9H0R4 259 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 REEP4Q9H6H4 257 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 BRD9Q9H8M2 597 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 B3GNT2Q9NY97 397 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 MBD1Q9UIS9 605 aaPredicted RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 HCN2Q9UL51 889 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 GREB1Q4ZG55 1949 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 NPIPB15A6NHN6 443 aaPredicted RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 H3BUI4 141 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 SEC14L5O43304 696 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 TPPPO94811 219 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 RAB36O95755 333 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 C1SP09871 688 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 POLR2CP19387 275 aaPredicted RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 ETV5P41161 510 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 AVPR1BP47901 424 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 STK19P49842 368 aaPredicted RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 ETV1P50549 477 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 RAE1P78406 368 aaKnown RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 B4GALNT1Q00973 533 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 C2orf80Q0P641 193 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 GPR17Q13304 367 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 ILKQ13418 452 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 ELOAQ14241 798 aaKnown RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 ANGPT1Q15389 498 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 CRB2Q5IJ48 1285 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 RETSATQ6NUM9 610 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 ANKRD54Q6NXT1 300 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 RSPO2Q6UXX9 243 aaPredicted RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 ZNF730Q6ZMV8 503 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 FAM92BQ6ZTR7 304 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 HUS1BQ8NHY5 278 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 LRR1Q96L50 414 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 SLC6A18Q96N87 628 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 PPIL3Q9H2H8 161 aaKnown RBP7.32□□□□□ -1.24
CD46-204ENST00000357714 FZD3Q9NPG1 666 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 GLTPQ9NZD2 209 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 RNF181Q9P0P0 153 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 GULP1Q9UBP9 304 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 CD84Q9UIB8 345 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 MGAT4BQ9UQ53 548 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 NLRC5Q86WI3 1866 aa7.32□□□□□ -1.24
CD46-204ENST00000357714 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.31□□□□□ -1.24
CD46-204ENST00000357714 HEPACAM2A8MVW5 462 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 ZNF197O14709 1029 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 FABP7O15540 132 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 LIM2P55344 173 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 CLDN20P56880 219 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 DSC1Q08554 894 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 SEC23BQ15437 767 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 SNAPC1Q16533 368 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 PLK5Q496M5 336 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 SPIN4Q56A73 249 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 ZNF628Q5EBL2 1059 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 RPS26P11Q5JNZ5 115 aaPredicted RBP7.31□□□□□ -1.24
CD46-204ENST00000357714 FAM180BQ6P0A1 224 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 DUSP18Q8NEJ0 188 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 OR7G3Q8NG95 312 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 DNAJA4Q8WW22 397 aaPredicted RBP7.31□□□□□ -1.24
CD46-204ENST00000357714 TM9SF4Q92544 642 aa7.31□□□□□ -1.24
CD46-204ENST00000357714 UFD1Q92890 307 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms