RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GRXCR1A8MXD5 290 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 GRID2O43424 1007 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 RGS9O75916 674 aaPredicted RBP14.24□□□□□ -0.13
CHD4-201ENST00000357008 AGTR1P30556 359 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 HTR2BP41595 481 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 Q6ZVL8 140 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 OR4K3Q96R72 315 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 PCDHGA2Q9Y5H1 932 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 ABCC6O95255 1503 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 SLC22A31A6NKX4 558 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 MEN1O00255 615 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 KHNYNO15037 678 aaKnown RBP14.24□□□□□ -0.13
CHD4-201ENST00000357008 CYP17A1P05093 508 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 COL28A1Q2UY09 1125 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.24□□□□□ -0.13
CHD4-201ENST00000357008 CCDC116Q8IYX3 515 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 ZNF285Q96NJ3 590 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 FEVQ99581 238 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 B3GAT2Q9NPZ5 323 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 EMC3Q9P0I2 261 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 NDRG2Q9UN36 371 aaKnown RBP14.24□□□□□ -0.13
CHD4-201ENST00000357008 MRPS17Q9Y2R5 130 aaKnown RBP14.24□□□□□ -0.13
CHD4-201ENST00000357008 KCNIP3Q9Y2W7 256 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 B4GALT2O60909 372 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 ACRV1P26436 265 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 CCND3P30281 292 aaPredicted RBP14.24□□□□□ -0.13
CHD4-201ENST00000357008 PYCR1P32322 319 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 GCGRP47871 477 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 FGL1Q08830 312 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 GRHL2Q6ISB3 625 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 ACBD7Q8N6N7 88 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 SUN3Q8TAQ9 357 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 THAP4Q8WY91 577 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 OTUB2Q96DC9 234 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 P2RY13Q9BPV8 354 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 SYT4Q9H2B2 425 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 NANSQ9NR45 359 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 ALKBH4Q9NXW9 302 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 TMEM98Q9Y2Y6 226 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 CENPBD1B2RD01 187 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 H7BY64 318 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 NME4O00746 187 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 CD9P21926 228 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 ARSKQ6UWY0 536 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 OR6N1Q8NGY5 312 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 PRAP1Q96NZ9 151 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 CMKLR1Q99788 373 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 AXIN1O15169 862 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 MAFKO60675 156 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 APOC3P02656 99 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 ADH7P40394 386 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 FRKP42685 505 aaPredicted RBP14.24□□□□□ -0.13
CHD4-201ENST00000357008 RING1Q06587 406 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 C2orf27AQ580R0 203 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 DPY19L3Q6ZPD9 716 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 ZNF767PQ75MW2 155 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 REM2Q8IYK8 340 aaPredicted RBP14.24□□□□□ -0.13
CHD4-201ENST00000357008 GDPD1Q8N9F7 314 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 CD99L2Q8TCZ2 262 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 S100PBPQ96BU1 408 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 C11orf84Q9BUA3 381 aaPredicted RBP14.24□□□□□ -0.13
CHD4-201ENST00000357008 CACNG6Q9BXT2 260 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 TDP1Q9NUW8 608 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 PCDHGA7Q9Y5G6 932 aa14.24□□□□□ -0.13
CHD4-201ENST00000357008 AMZ1Q400G9 498 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 FLYWCH1Q4VC44 716 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 KIF18BQ86Y91 864 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 CELF5Q8N6W0 485 aaKnown RBP14.23□□□□□ -0.13
CHD4-201ENST00000357008 OR4K17Q8NGC6 315 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 PPIL3Q9H2H8 161 aaKnown RBP14.23□□□□□ -0.13
CHD4-201ENST00000357008 ACSL5Q9ULC5 683 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 PADI2Q9Y2J8 665 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 B4DGG1 531 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 MRPS14O60783 128 aaKnown RBP14.23□□□□□ -0.13
CHD4-201ENST00000357008 KLBQ86Z14 1044 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 DPH2Q9BQC3 489 aaPredicted RBP14.23□□□□□ -0.13
CHD4-201ENST00000357008 VNN3Q9NY84 501 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 GPR83Q9NYM4 423 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 TMEM14AQ9Y6G1 99 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 KAT6AQ92794 2004 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 GLTPD2A6NH11 291 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 CD8B2A6NJW9 211 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 CD8BP10966 210 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 TYRP14679 529 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 ZNF14P17017 642 aaPredicted RBP14.23□□□□□ -0.13
CHD4-201ENST00000357008 HNF1BP35680 557 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 ACTA2P62736 377 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 ACTG2P63267 376 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 SH3BP2P78314 561 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 SCAPQ12770 1279 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 GAS6Q14393 721 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 FAM214AQ32MH5 1076 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 ATG5Q9H1Y0 275 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 KLRF1Q9NZS2 232 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 MARCH4Q9P2E8 410 aaPredicted RBP14.23□□□□□ -0.13
CHD4-201ENST00000357008 PPM1BO75688 479 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 ADAP00813 363 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 GJA1P17302 382 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 CDK10Q15131 360 aa14.23□□□□□ -0.13
CHD4-201ENST00000357008 TSPAN33Q86UF1 283 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms