RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ENDOUP21128 410 aaKnown RBP13.47□□□□□ -0.25
SREBF1-202ENST00000355815 SRSF11Q05519 484 aaKnown RBP13.47□□□□□ -0.25
SREBF1-202ENST00000355815 CYBRD1Q53TN4 286 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 SLC35F1Q5T1Q4 408 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 COMMD7Q86VX2 200 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 VRK3Q8IV63 474 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 CHDHQ8NE62 594 aaPredicted RBP13.47□□□□□ -0.25
SREBF1-202ENST00000355815 OR6Q1Q8NGQ2 317 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 OR10G6Q8NH81 332 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 RHOXF1Q8NHV9 184 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 OR8D1Q8WZ84 308 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 LHX3Q9UBR4 397 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 TAC3Q9UHF0 121 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 POFUT2Q9Y2G5 429 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 IGLV3-10A0A075B6K4 115 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 OR7A17O14581 309 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 MPZL2O60487 215 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 AVPR1BP47901 424 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 ADAM15Q13444 863 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 GRIN2CQ14957 1233 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 SPHARQ15513 63 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 POMGNT2Q8NAT1 580 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 BEST4Q8NFU0 473 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 HMGCLL1Q8TB92 370 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 IRF7Q92985 503 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 ARL6Q9H0F7 186 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 XKR8Q9H6D3 395 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 TM9SF3Q9HD45 589 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 ELOVL2Q9NXB9 296 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 TAS2R3Q9NYW6 316 aa13.47□□□□□ -0.25
SREBF1-202ENST00000355815 TBC1D3DA0A087WVF3 549 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 TBC1D3IA0A087WXS9 549 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 TBC1D3EA0A087X179 549 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 TBC1D3KA0A087X1G2 549 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 TBC1D3FA6NER0 549 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-202ENST00000355815 AGAP5A6NIR3 686 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 TBC1D3LB9A6J9 549 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 B3GALNT1O75752 331 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 TBC1D3HP0C7X1 549 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 ACP5P13686 325 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 MC1RQ01726 317 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 TBC1D3GQ6DHY5 549 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 TBC1D3CQ6IPX1 549 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 RAB12Q6IQ22 244 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 TBC1D3Q8IZP1 549 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-202ENST00000355815 CHST4Q8NCG5 386 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 OR2T35Q8NGX2 323 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 BCL2L14Q9BZR8 327 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 PAK6Q9NQU5 681 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-202ENST00000355815 POT1Q9NUX5 634 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 CD300AQ9UGN4 299 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 A0A1W2PRB8 838 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 OR2AT4A6NND4 320 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 PEX14O75381 377 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 C8orf89P0DMQ9 161 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 LHCGRP22888 699 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 SOX3P41225 446 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 RNF144AP50876 292 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-202ENST00000355815 TEAD4Q15561 434 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 ODF4Q2M2E3 257 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 CCDC58Q4VC31 144 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 ATAD3CQ5T2N8 411 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 ELP2Q6IA86 826 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 HAGHLQ6PII5 290 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-202ENST00000355815 SBSNQ6UWP8 590 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 WASH2PQ6VEQ5 465 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.25
SREBF1-202ENST00000355815 PARP16Q8N5Y8 322 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 GPR151Q8TDV0 419 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 KCNN2Q9H2S1 579 aa13.46□□□□□ -0.25
SREBF1-202ENST00000355815 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.46□□□□□ -0.25
SREBF1-202ENST00000355815 SMLR1H3BR10 107 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 ZNF701M0R085 212 aaPredicted RBP13.46□□□□□ -0.26
SREBF1-202ENST00000355815 FXYD1O00168 92 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 DBIP07108 87 aaKnown RBP13.46□□□□□ -0.26
SREBF1-202ENST00000355815 ANXA3P12429 323 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 ETFAP13804 333 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 DCKP27707 260 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 PDHA2P29803 388 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 KDELR2P33947 212 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 CTSCP53634 463 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 SMUG1Q53HV7 270 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 CATSPEREQ5SY80 951 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 LRRN1Q6UXK5 716 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 GAREM2Q75VX8 874 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 DCP2Q8IU60 420 aaKnown RBP13.46□□□□□ -0.26
SREBF1-202ENST00000355815 FTMTQ8N4E7 242 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 PJA1Q8NG27 643 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 TSPEARQ8WU66 669 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 UBQLN2Q9UHD9 624 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 ATAD5Q96QE3 1844 aa13.46□□□□□ -0.26
SREBF1-202ENST00000355815 FAM86C2PA6NEL3 165 aa13.45□□□□□ -0.26
SREBF1-202ENST00000355815 CACNG3O60359 315 aa13.45□□□□□ -0.26
SREBF1-202ENST00000355815 BCHEP06276 602 aa13.45□□□□□ -0.26
SREBF1-202ENST00000355815 NUDT7P0C024 238 aa13.45□□□□□ -0.26
SREBF1-202ENST00000355815 HMGA1P17096 107 aaKnown RBP13.45□□□□□ -0.26
SREBF1-202ENST00000355815 ALDH3B2P48448 385 aa13.45□□□□□ -0.26
SREBF1-202ENST00000355815 SPINT3P49223 89 aa13.45□□□□□ -0.26
SREBF1-202ENST00000355815 CLCN7P51798 805 aa13.45□□□□□ -0.26
SREBF1-202ENST00000355815 SMCO1Q147U7 214 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms