RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 IRF7Q92985 503 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 MND1Q9BWT6 205 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 SLAMF7Q9NQ25 335 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 CCDC177Q9NQR7 707 aaPredicted RBP23.33■■□□□ 1.32
CPNE1-202ENST00000352393 STUB1Q9UNE7 303 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 ITM2BQ9Y287 266 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 C5orf58C9J3I9 102 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 FAAHO00519 579 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 UGT2B17O75795 530 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 CCR2P41597 374 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 DGKGP49619 791 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 NCF4Q15080 339 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 TCTN3Q6NUS6 607 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 NRSN1Q8IZ57 195 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 SLC34A3Q8N130 599 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 TP53INP1Q96A56 240 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 TMEM19Q96HH6 336 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 ZNF221Q9UK13 617 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 HYKKA2RU49 373 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 SLC35F4A4IF30 521 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 SOD1P00441 154 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 HBQ1P09105 142 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 GRIN2CQ14957 1233 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 ZNF79Q15937 498 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 NXNL2Q5VZ03 156 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 FAM180BQ6P0A1 224 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 TNFAIP8L2Q6P589 184 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-202ENST00000352393 KIAA0907Q7Z7F0 614 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-202ENST00000352393 SLC9B2Q86UD5 537 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 VN1R2Q8NFZ6 395 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 UBE2E3Q969T4 207 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 PCDHGB2Q9Y5G2 931 aa23.32■■□□□ 1.32
CPNE1-202ENST00000352393 TPST2O60704 377 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 KRT8P05787 483 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 C8AP07357 584 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 ITGB7P26010 798 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 RFX2P48378 723 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 RORCP51449 518 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 PSPHP78330 225 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 DCST1Q5T197 706 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 ATAD3CQ5T2N8 411 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 MFSD4BQ5TF39 518 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 NANOGP1Q8N7R0 232 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 FUZQ9BT04 418 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 MUTYHQ9UIF7 546 aa23.31■■□□□ 1.32
CPNE1-202ENST00000352393 RPL36Q9Y3U8 105 aaKnown RBP23.31■■□□□ 1.32
CPNE1-202ENST00000352393 PSMA1P25786 263 aaKnown RBP23.3■■□□□ 1.32
CPNE1-202ENST00000352393 XKP51811 444 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 PGBD2Q6P3X8 592 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 TMPRSS11AQ6ZMR5 421 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 LAX1Q8IWV1 398 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 CACTIN-AS1Q8N1I8 211 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 ZNF557Q8N988 423 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-202ENST00000352393 IL17RCQ8NAC3 791 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 OR8J1Q8NGP2 316 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 DTD2Q96FN9 168 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 PPP1R16AQ96I34 528 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 YIPF2Q9BWQ6 316 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 SPHK2Q9NRA0 654 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 SNX11Q9Y5W9 270 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 RGS5O15539 181 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 OR10H3O60404 316 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 H1F0P07305 194 aaKnown RBP23.3■■□□□ 1.32
CPNE1-202ENST00000352393 DDCP20711 480 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 ZMAT1Q5H9K5 638 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 CASP12Q6UXS9 341 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 TMIGD1Q6UXZ0 262 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 PARS2Q7L3T8 475 aaKnown RBP23.3■■□□□ 1.32
CPNE1-202ENST00000352393 ADGRF3Q8IZF5 1079 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 PROKR2Q8NFJ6 384 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 OR5P2Q8WZ92 322 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 NEDD4LQ96PU5 975 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 TSSK6Q9BXA6 273 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 ZNF717Q9BY31 904 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-202ENST00000352393 OR2B2Q9GZK3 357 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 SRRQ9GZT4 340 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 ACAD8Q9UKU7 415 aa23.3■■□□□ 1.32
CPNE1-202ENST00000352393 LTBP2Q14767 1821 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 IQCMA0A1B0GVH7 501 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 RB1P06400 928 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 CA8P35219 290 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 MLLT11Q13015 90 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-202ENST00000352393 OCLNQ16625 522 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 CNKSR3Q6P9H4 555 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 TRAPPC5Q8IUR0 188 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 OR4D11Q8NGI4 311 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 VWCEQ96DN2 955 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 COQ10AQ96MF6 247 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 SNTG1Q9NSN8 517 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 HEPACAM2A8MVW5 462 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 CACNB4O00305 520 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-202ENST00000352393 PLPP1O14494 284 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 TBX19O60806 448 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 CYP7B1O75881 506 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 PDE9AO76083 593 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 TP53P04637 393 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-202ENST00000352393 SYN1P17600 705 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 PRAMEF14Q5SWL7 426 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 PRAMEF13Q5VWM6 474 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 ZNF517Q6ZMY9 492 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms